5han: Difference between revisions

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-{{Large structure}}
 ==Structure function studies of R. palustris RubisCO (S59F mutant; CABP-bound)==
-<StructureSection load='5han' size='340' side='right' caption='[[5han]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
+<StructureSection load='5han' size='340' side='right'caption='[[5han]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5han]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/"rhodobacillus_palustris"_molisch_1907 "rhodobacillus palustris" molisch 1907]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HAN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HAN FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5han]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HAN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HAN FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CAP:2-CARBOXYARABINITOL-1,5-DIPHOSPHATE'>CAP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAP:2-CARBOXYARABINITOL-1,5-DIPHOSPHATE'>CAP</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5hao|5hao]], [[5hat|5hat]], [[5hjx|5hjx]], [[5hjy|5hjy]], [[5hk4|5hk4]], [[5hql|5hql]], [[5hqm|5hqm]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5han FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5han OCA], [https://pdbe.org/5han PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5han RCSB], [https://www.ebi.ac.uk/pdbsum/5han PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5han ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5han FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5han OCA], [http://pdbe.org/5han PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5han RCSB], [http://www.ebi.ac.uk/pdbsum/5han PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5han ProSAT]</span></td></tr>
 </table>
-{{Large structure}}
 == Function ==
-[[http://www.uniprot.org/uniprot/RBL2_RHOPA RBL2_RHOPA]] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity).
+[https://www.uniprot.org/uniprot/RBL2_RHOPA RBL2_RHOPA] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity).
+==See Also==
+*[[RuBisCO 3D structures|RuBisCO 3D structures]]
 __TOC__
 </StructureSection>
-[[Category: Rhodobacillus palustris molisch 1907]]
+[[Category: Large Structures]]
-[[Category: Ribulose-bisphosphate carboxylase]]
+[[Category: Rhodopseudomonas palustris]]
-[[Category: Arbing, M A]]
+[[Category: Arbing MA]]
-[[Category: Leong, J G]]
+[[Category: Leong JG]]
-[[Category: North, J A]]
+[[Category: North JA]]
-[[Category: Satagopan, S]]
+[[Category: Satagopan S]]
-[[Category: Tabita, F R]]
+[[Category: Tabita FR]]
-[[Category: Varaljay, V A]]
+[[Category: Varaljay VA]]
-[[Category: Hexamer]]
-[[Category: Lyase]]
-[[Category: Rubisco]]