5h2i: Difference between revisions

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 ==A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 110 ns after photoexcitation==
-<StructureSection load='5h2i' size='340' side='right' caption='[[5h2i]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+<StructureSection load='5h2i' size='340' side='right'caption='[[5h2i]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5h2i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Halobacterium_salinarum_nrc-1 Halobacterium salinarum nrc-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H2I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5H2I FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5h2i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum_NRC-1 Halobacterium salinarum NRC-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H2I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5H2I FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C14:TETRADECANE'>C14</scene>, <scene name='pdbligand=D10:DECANE'>D10</scene>, <scene name='pdbligand=DD9:NONANE'>DD9</scene>, <scene name='pdbligand=HP6:HEPTANE'>HP6</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=MYS:PENTADECANE'>MYS</scene>, <scene name='pdbligand=OCT:N-OCTANE'>OCT</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=TRD:TRIDECANE'>TRD</scene>, <scene name='pdbligand=UND:UNDECANE'>UND</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5b6v|5b6v]], [[5b6w|5b6w]], [[5b6x|5b6x]], [[5b6y|5b6y]], [[5b6z|5b6z]], [[5h2h|5h2h]], [[5h2j|5h2j]], [[5h2k|5h2k]], [[5h2l|5h2l]], [[5h2m|5h2m]], [[5h2n|5h2n]], [[5h2o|5h2o]], [[5h2p|5h2p]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C14:TETRADECANE'>C14</scene>, <scene name='pdbligand=D10:DECANE'>D10</scene>, <scene name='pdbligand=DD9:NONANE'>DD9</scene>, <scene name='pdbligand=HP6:HEPTANE'>HP6</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=MYS:PENTADECANE'>MYS</scene>, <scene name='pdbligand=OCT:N-OCTANE'>OCT</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=TRD:TRIDECANE'>TRD</scene>, <scene name='pdbligand=UND:UNDECANE'>UND</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5h2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h2i OCA], [http://pdbe.org/5h2i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5h2i RCSB], [http://www.ebi.ac.uk/pdbsum/5h2i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5h2i ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5h2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h2i OCA], [https://pdbe.org/5h2i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5h2i RCSB], [https://www.ebi.ac.uk/pdbsum/5h2i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5h2i ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA]] Light-driven proton pump.
+[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 19: @@
 </div>
 <div class="pdbe-citations 5h2i" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Bacteriorhodopsin 3D structures|Bacteriorhodopsin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Halobacterium salinarum nrc-1]]
+[[Category: Halobacterium salinarum NRC-1]]
-[[Category: Arima, T]]
+[[Category: Large Structures]]
-[[Category: Iwata, S]]
+[[Category: Arima T]]
-[[Category: Nakane, T]]
+[[Category: Iwata S]]
-[[Category: Nango, E]]
+[[Category: Nakane T]]
-[[Category: Neutze, R]]
+[[Category: Nango E]]
-[[Category: Royant, A]]
+[[Category: Neutze R]]
-[[Category: Tanaka, T]]
+[[Category: Royant A]]
-[[Category: Bacteriorhodopsin]]
+[[Category: Tanaka T]]
-[[Category: Proton transport]]
-[[Category: Sacla]]
-[[Category: Time-resolved serial femtosecond crystallography]]
-[[Category: Xfel]]