1ym8: Difference between revisions

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OCA

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 ==crystal structure of GZZ shows up puckering of the proline ring in the Xaa position.==
-<StructureSection load='1ym8' size='340' side='right' caption='[[1ym8]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+<StructureSection load='1ym8' size='340' side='right'caption='[[1ym8]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1ym8]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YM8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YM8 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1ym8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saimiriine_gammaherpesvirus_2 Saimiriine gammaherpesvirus 2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YM8 FirstGlance]. <br>
-</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1v4f|1v4f]], [[1v6q|1v6q]], [[1v7h|1v7h]], [[1g9w|1g9w]], [[1k6f|1k6f]], [[1itt|1itt]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ym8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ym8 OCA], [http://pdbe.org/1ym8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ym8 RCSB], [http://www.ebi.ac.uk/pdbsum/1ym8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ym8 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ym8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ym8 OCA], [https://pdbe.org/1ym8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ym8 RCSB], [https://www.ebi.ac.uk/pdbsum/1ym8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ym8 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q80BK4_SHV2 Q80BK4_SHV2]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 21: @@
 ==See Also==
-*[[Collagen|Collagen]]
+*[[Collagen 3D structures|Collagen 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bachinger, H P]]
+[[Category: Large Structures]]
-[[Category: Mizuno, K]]
+[[Category: Saimiriine gammaherpesvirus 2]]
-[[Category: Schumacher, M A]]
+[[Category: Bachinger HP]]
-[[Category: Collagen]]
+[[Category: Mizuno K]]
-[[Category: Proline pucker]]
+[[Category: Schumacher MA]]
-[[Category: Structural protein]]
-[[Category: Triple helix]]