1ykv: Difference between revisions

No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Crystal structure of the Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene==
==Crystal structure of the Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene==
<StructureSection load='1ykv' size='340' side='right' caption='[[1ykv]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
<StructureSection load='1ykv' size='340' side='right'caption='[[1ykv]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1ykv]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YKV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YKV FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ykv]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YKV FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DAI:(3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1,2]-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE'>DAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ykq|1ykq]], [[1yls|1yls]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAI:(3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1,2]-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE'>DAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ykv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ykv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ykv RCSB], [http://www.ebi.ac.uk/pdbsum/1ykv PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ykv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ykv OCA], [https://pdbe.org/1ykv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ykv RCSB], [https://www.ebi.ac.uk/pdbsum/1ykv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ykv ProSAT]</span></td></tr>
<table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 16:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 1ykv" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Ribozyme|Ribozyme]]
*[[Ribozyme 3D structures|Ribozyme 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Dauter, Z.]]
[[Category: Large Structures]]
[[Category: Hobartner, C.]]
[[Category: Dauter Z]]
[[Category: Jaschke, A.]]
[[Category: Hobartner C]]
[[Category: Keiper, S.]]
[[Category: Jaschke A]]
[[Category: Malinina, L.]]
[[Category: Keiper S]]
[[Category: Micura, R.]]
[[Category: Malinina L]]
[[Category: Patel, D J.]]
[[Category: Micura R]]
[[Category: Phan, A T.]]
[[Category: Patel DJ]]
[[Category: Polonskaia, A.]]
[[Category: Phan AT]]
[[Category: Serganov, A.]]
[[Category: Polonskaia A]]
[[Category: Skripkin, E.]]
[[Category: Serganov A]]
[[Category: Tereshko, V.]]
[[Category: Skripkin E]]
[[Category: Wombacher, R.]]
[[Category: Tereshko V]]
[[Category: Carbon-carbon bond]]
[[Category: Wombacher R]]
[[Category: Catalytic mechanism]]
[[Category: Diels-alder reaction]]
[[Category: Ribozyme]]
[[Category: Rna]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA