1vew: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1vew.gif|left|200px]]<br />
-<applet load="1vew" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1vew, resolution 2.1&Aring;" />
-'''MANGANESE SUPEROXIDE DISMUTASE FROM ESCHERICHIA COLI'''<br />
-==About this Structure==
+==MANGANESE SUPEROXIDE DISMUTASE FROM ESCHERICHIA COLI==
-VEW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with MN and OH as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] Structure known Active Sites: MN1, MN2, MN3 and MN4. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1VEW OCA].
+<StructureSection load='1vew' size='340' side='right'caption='[[1vew]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1vew]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VEW FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vew FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vew OCA], [https://pdbe.org/1vew PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vew RCSB], [https://www.ebi.ac.uk/pdbsum/1vew PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vew ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SODM_ECOLI SODM_ECOLI] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1vew_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vew ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
+__TOC__
+</StructureSection>
 [[Category: Escherichia coli]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Superoxide dismutase]]
+[[Category: Baker EN]]
-[[Category: Baker, E.N.]]
+[[Category: Baker HM]]
-[[Category: Baker, H.M.]]
+[[Category: Edwards RA]]
-[[Category: Edwards, R.A.]]
+[[Category: Jameson GB]]
-[[Category: Jameson, G.B.]]
+[[Category: Whittaker JW]]
-[[Category: Whittaker, J.W.]]
+[[Category: Whittaker MM]]
-[[Category: Whittaker, M.M.]]
-[[Category: MN]]
-[[Category: OH]]
-[[Category: dna binding]]
-[[Category: manganese enzyme]]
-[[Category: metalloprotein]]
-[[Category: oxidoreductase]]
-[[Category: superoxide dismutase]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov  5 13:40:14 2007''