1eui: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN==
-<StructureSection load='1eui' size='340' side='right' caption='[[1eui]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
+<StructureSection load='1eui' size='340' side='right'caption='[[1eui]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1eui]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bppb2 Bppb2] and [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EUI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EUI FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1eui]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_phage_PBS2 Bacillus phage PBS2] and [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EUI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EUI FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eui FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eui OCA], [http://pdbe.org/1eui PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1eui RCSB], [http://www.ebi.ac.uk/pdbsum/1eui PDBsum]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eui FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eui OCA], [https://pdbe.org/1eui PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eui RCSB], [https://www.ebi.ac.uk/pdbsum/1eui PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eui ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/UNG_ECOLI UNG_ECOLI]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.[HAMAP-Rule:MF_00148] [[http://www.uniprot.org/uniprot/UNGI_BPPB2 UNGI_BPPB2]] This protein binds specifically and reversibly to the host uracil-DNA glycosylase, preventing removal of uracil residues from PBS2 DNA by the host uracil-excision repair system.
+[https://www.uniprot.org/uniprot/UNG_ECOLI UNG_ECOLI] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.[HAMAP-Rule:MF_00148]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eu/1eui_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eu/1eui_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 28: / Line 30: @@
 ==See Also==
-*[[DNA glycosylase|DNA glycosylase]]
+*[[DNA glycosylase 3D structures|DNA glycosylase 3D structures]]
-*[[Uracil glycosylate inhibitor|Uracil glycosylate inhibitor]]
+*[[Uracil glycosylase inhibitor|Uracil glycosylase inhibitor]]
-*[[Uracil-DNA glycosylase|Uracil-DNA glycosylase]]
-*[[Uracil-DNA glycosylase inhibitor|Uracil-DNA glycosylase inhibitor]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bppb2]]
+[[Category: Bacillus phage PBS2]]
 [[Category: Escherichia coli]]
-[[Category: Handa, P]]
+[[Category: Large Structures]]
-[[Category: Purnapatre, K]]
+[[Category: Handa P]]
-[[Category: Ravishankar, R]]
+[[Category: Purnapatre K]]
-[[Category: Roy, S]]
+[[Category: Ravishankar R]]
-[[Category: Sagar, M B]]
+[[Category: Roy S]]
-[[Category: Varshney, U]]
+[[Category: Sagar MB]]
-[[Category: Vijayan, M]]
+[[Category: Varshney U]]
-[[Category: Base excision]]
+[[Category: Vijayan M]]
-[[Category: Dna repair]]
-[[Category: Glycosylase]]
-[[Category: Inhibitor]]