1b0t: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1b0t.gif|left|200px]]


{{Structure
==D15K/K84D MUTANT OF AZOTOBACTER VINELANDII FDI==
|PDB= 1b0t |SIZE=350|CAPTION= <scene name='initialview01'>1b0t</scene>, resolution 2.10&Aring;
<StructureSection load='1b0t' size='340' side='right'caption='[[1b0t]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>
<table><tr><td colspan='2'>[[1b0t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B0T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1B0T FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1b0t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b0t OCA], [https://pdbe.org/1b0t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1b0t RCSB], [https://www.ebi.ac.uk/pdbsum/1b0t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1b0t ProSAT]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1b0t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b0t OCA], [http://www.ebi.ac.uk/pdbsum/1b0t PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1b0t RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/FER1_AZOVI FER1_AZOVI] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b0/1b0t_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1b0t ConSurf].
<div style="clear:both"></div>


'''D15K/K84D MUTANT OF AZOTOBACTER VINELANDII FDI'''
==See Also==
 
*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
1B0T is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B0T OCA].
[[Category: Azotobacter vinelandii]]
[[Category: Azotobacter vinelandii]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Burgess, B K.]]
[[Category: Burgess BK]]
[[Category: Chen, K.]]
[[Category: Chen K]]
[[Category: Kemper, M A.]]
[[Category: Kemper MA]]
[[Category: Sridhar, V.]]
[[Category: Sridhar V]]
[[Category: Stout, C D.]]
[[Category: Stout CD]]
[[Category: electron transport]]
[[Category: iron-sulfur]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 18:51:23 2008''

Latest revision as of 08:34, 9 August 2023

D15K/K84D MUTANT OF AZOTOBACTER VINELANDII FDID15K/K84D MUTANT OF AZOTOBACTER VINELANDII FDI

Structural highlights

1b0t is a 1 chain structure with sequence from Azotobacter vinelandii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FER1_AZOVI Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1b0t, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA