1aq7: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==TRYPSIN WITH INHIBITOR AERUGINOSIN 98-B==
-<StructureSection load='1aq7' size='340' side='right' caption='[[1aq7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+<StructureSection load='1aq7' size='340' side='right'caption='[[1aq7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1aq7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AQ7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1AQ7 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1aq7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Microcystis_aeruginosa_NIES-98 Microcystis aeruginosa NIES-98]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AQ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AQ7 FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=34H:(2R)-2-HYDROXY-3-(4-HYDROXYPHENYL)PROPANOIC+ACID'>34H</scene>, <scene name='pdbligand=AG2:AGMATINE'>AG2</scene>, <scene name='pdbligand=DIL:D-ISOLEUCINE'>DIL</scene>, <scene name='pdbligand=XPR:(2S,3AS,6R,7AS)-6-(SULFOOXY)OCTAHYDRO-1H-INDOLE-2-CARBOXYLIC+ACID'>XPR</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=34H:(2R)-2-HYDROXY-3-(4-HYDROXYPHENYL)PROPANOIC+ACID'>34H</scene>, <scene name='pdbligand=AG2:AGMATINE'>AG2</scene>, <scene name='pdbligand=DIL:D-ISOLEUCINE'>DIL</scene>, <scene name='pdbligand=XPR:(2S,3AS,6R,7AS)-6-(SULFOOXY)OCTAHYDRO-1H-INDOLE-2-CARBOXYLIC+ACID'>XPR</scene></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1aq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aq7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1aq7 RCSB], [http://www.ebi.ac.uk/pdbsum/1aq7 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1aq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aq7 OCA], [https://pdbe.org/1aq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1aq7 RCSB], [https://www.ebi.ac.uk/pdbsum/1aq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aq7 ProSAT]</span></td></tr>
-<table>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/1aq7_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/1aq7_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aq7 ConSurf].
 <div style="clear:both"></div>
 ==See Also==
-*[[CHEM2052 Tutorial|CHEM2052 Tutorial]]
+*[[Trypsin 3D structures|Trypsin 3D structures]]
-*[[Trypsin|Trypsin]]
 __TOC__
 </StructureSection>
 [[Category: Bos taurus]]
-[[Category: Trypsin]]
+[[Category: Large Structures]]
-[[Category: Clardy, J.]]
+[[Category: Microcystis aeruginosa NIES-98]]
-[[Category: Murakami, M.]]
+[[Category: Clardy J]]
-[[Category: Sandler, B.]]
+[[Category: Murakami M]]
-[[Category: Hydrolase]]
+[[Category: Sandler B]]
-[[Category: Hydrolase-hydrolase inhibitor complex]]
-[[Category: Inhibitor]]
-[[Category: Serine protease]]