5g2x: Difference between revisions
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<SX load='5g2x' size='340' side='right' viewer='molstar' caption='[[5g2x]], [[Resolution|resolution]] 3.80Å' scene=''> | <SX load='5g2x' size='340' side='right' viewer='molstar' caption='[[5g2x]], [[Resolution|resolution]] 3.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5g2x]] is a 3 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5g2x]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_cremoris Lactococcus cremoris] and [https://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5G2X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5G2X FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.8Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5g2x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5g2x OCA], [https://pdbe.org/5g2x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5g2x RCSB], [https://www.ebi.ac.uk/pdbsum/5g2x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5g2x ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/LTRA_LACLC LTRA_LACLC] Multifunctional protein that promotes group II intron splicing and mobility by acting both on RNA and DNA. It has three activities: reverse transcriptase (RT) for intron duplication, maturase to promote splicing, and DNA endonuclease for site-specific cleavage of recipient alleles. The intron-encoded protein promotes splicing by facilitating the formation of the catalytically active structure of the intron RNA. After splicing, the protein remains bound to the excised intron lariat RNA, forming ribonucleoprotein particles, and cleaving the antisense strand of the recipient DNA in the 3' exon. After DNA cleavage, retrohoming occurs by a target DNA-primed reverse transcription of the intron RNA that had reverse spliced into the sense strand of the recipient DNA. It also contributes to the recognition of the DNA target site and acts as a repressor of its own translation. | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</SX> | </SX> | ||
[[Category: | [[Category: Lactococcus cremoris]] | ||
[[Category: Lactococcus lactis]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Agrawal | [[Category: Agrawal RK]] | ||
[[Category: Belfort | [[Category: Belfort M]] | ||
[[Category: Kaushal | [[Category: Kaushal PS]] | ||
[[Category: Piazza | [[Category: Piazza CL]] | ||
[[Category: Qu | [[Category: Qu G]] | ||
[[Category: Shigematsu | [[Category: Shigematsu H]] | ||
[[Category: Wang | [[Category: Wang HW]] | ||
[[Category: Wang | [[Category: Wang J]] | ||