5fqe: Difference between revisions

Jump to navigation Jump to search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens==
==The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens==
<StructureSection load='5fqe' size='340' side='right' caption='[[5fqe]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
<StructureSection load='5fqe' size='340' side='right'caption='[[5fqe]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5fqe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_perfringens"_veillon_and_zuber_1898 "bacillus perfringens" veillon and zuber 1898]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FQE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FQE FirstGlance]. <br>
<table><tr><td colspan='2'>[[5fqe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FQE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FQE FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.53&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fqf|5fqf]], [[5fqg|5fqg]], [[5fqh|5fqh]], [[5fr0|5fr0]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fqe OCA], [http://pdbe.org/5fqe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fqe RCSB], [http://www.ebi.ac.uk/pdbsum/5fqe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fqe ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fqe OCA], [https://pdbe.org/5fqe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fqe RCSB], [https://www.ebi.ac.uk/pdbsum/5fqe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fqe ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0H2YNR7_CLOP1 A0A0H2YNR7_CLOP1]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus perfringens veillon and zuber 1898]]
[[Category: Clostridium perfringens]]
[[Category: Abe, K T]]
[[Category: Large Structures]]
[[Category: Alteen, M]]
[[Category: Abe KT]]
[[Category: Boraston, A B]]
[[Category: Alteen M]]
[[Category: Laurie, C]]
[[Category: Boraston AB]]
[[Category: Noach, I]]
[[Category: Laurie C]]
[[Category: Pluvinage, B]]
[[Category: Noach I]]
[[Category: Vocadlo, D J]]
[[Category: Pluvinage B]]
[[Category: Ganglioside]]
[[Category: Vocadlo DJ]]
[[Category: Gh123]]
[[Category: Globoside]]
[[Category: Glycoside hydrolase]]
[[Category: Glycosphingolipid]]
[[Category: Hydrolase]]
[[Category: Substrate- assisted catalysis]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA