7yl2: Difference between revisions

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'''Unreleased structure'''


The entry 7yl2 is ON HOLD
==Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor Y07004==
 
<StructureSection load='7yl2' size='340' side='right'caption='[[7yl2]], [[Resolution|resolution]] 1.62&Aring;' scene=''>
Authors: Huang, Y., Wei, A., Dong, R., Xu, H., Zhang, C., Chen, Z., Li, J., Wu, X., Zhang, Y., Xu, Y.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[7yl2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7YL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7YL2 FirstGlance]. <br>
Description: Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor Y07004
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.62&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=JCO:N-(1-ethyl-2-oxidanylidene-3H-indol-5-yl)cyclohexanesulfonamide'>JCO</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
[[Category: Zhang, Y]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7yl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7yl2 OCA], [https://pdbe.org/7yl2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7yl2 RCSB], [https://www.ebi.ac.uk/pdbsum/7yl2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7yl2 ProSAT]</span></td></tr>
[[Category: Wu, X]]
</table>
[[Category: Xu, H]]
== Disease ==
[[Category: Li, J]]
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>
[[Category: Chen, Z]]
== Function ==
[[Category: Dong, R]]
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
[[Category: Zhang, C]]
== References ==
[[Category: Xu, Y]]
<references/>
[[Category: Wei, A]]
__TOC__
[[Category: Huang, Y]]
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Chen Z]]
[[Category: Dong R]]
[[Category: Huang Y]]
[[Category: Li J]]
[[Category: Wei A]]
[[Category: Wu X]]
[[Category: Xu H]]
[[Category: Xu Y]]
[[Category: Zhang C]]
[[Category: Zhang Y]]

Latest revision as of 15:34, 26 July 2023

Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor Y07004Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor Y07004

Structural highlights

7yl2 is a 1 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.62Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

BRD4_HUMAN Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.[1] [2]

Function

BRD4_HUMAN Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).

References

  1. French CA, Miyoshi I, Kubonishi I, Grier HE, Perez-Atayde AR, Fletcher JA. BRD4-NUT fusion oncogene: a novel mechanism in aggressive carcinoma. Cancer Res. 2003 Jan 15;63(2):304-7. PMID:12543779
  2. French CA, Miyoshi I, Aster JC, Kubonishi I, Kroll TG, Dal Cin P, Vargas SO, Perez-Atayde AR, Fletcher JA. BRD4 bromodomain gene rearrangement in aggressive carcinoma with translocation t(15;19). Am J Pathol. 2001 Dec;159(6):1987-92. PMID:11733348 doi:10.1016/S0002-9440(10)63049-0

7yl2, resolution 1.62Å

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