5f4o: Difference between revisions
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==Protruding domain of GII.17 norovirus Kawasaki308== | ==Protruding domain of GII.17 norovirus Kawasaki308== | ||
<StructureSection load='5f4o' size='340' side='right' caption='[[5f4o]], [[Resolution|resolution]] 1.59Å' scene=''> | <StructureSection load='5f4o' size='340' side='right'caption='[[5f4o]], [[Resolution|resolution]] 1.59Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5f4o]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5F4O OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[5f4o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norovirus_Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308 Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5F4O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5F4O FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.59Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5f4o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5f4o OCA], [https://pdbe.org/5f4o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5f4o RCSB], [https://www.ebi.ac.uk/pdbsum/5f4o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5f4o ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/A0A0E4B1P1_9CALI A0A0E4B1P1_9CALI] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 5f4o" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5f4o" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Norovirus Hu/GII/JP/2015/GII P17_GII 17/Kawasaki308]] | |||
[[Category: Hansman GS]] | |||
[[Category: Norovirus]] | [[Category: Singh BK]] | ||
[[Category: | |||
[[Category: | |||
Latest revision as of 11:46, 12 July 2023
Protruding domain of GII.17 norovirus Kawasaki308Protruding domain of GII.17 norovirus Kawasaki308
Structural highlights
FunctionPublication Abstract from PubMedRecent reports suggest that human GII.17 noroviruses are increasing in prevalence. We analyzed the evolutionary changes of three GII.17 capsid protruding (P) domains. We found that the GII.17 P domains had little cross-reactivity with antisera raised against the dominant GII.4 strains. X-ray structural analysis of GII.17 P domains from 2002 to 2014/15 suggested that surface exposed substitutions on the uppermost part of the P domain might have generated a novel 2014/15 GII.17 variant. Structural evolution of the emerging 2014/15 GII.17 noroviruses.,Singh BK, Koromyslova A, Hefele L, Gurth C, Hansman GS J Virol. 2015 Dec 23. pii: JVI.03119-15. PMID:26699640[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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