5ehm: Difference between revisions

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-'''Unreleased structure'''
-The entry 5ehm is ON HOLD  until Paper Publication
+==Crystal structure of the Drosophila CG3822 KaiR1D ligand binding domain complex with NMDA==
+<StructureSection load='5ehm' size='340' side='right'caption='[[5ehm]], [[Resolution|resolution]] 1.28&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5ehm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EHM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EHM FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.281&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OEM:N-METHYL-D-ASPARTIC+ACID'>OEM</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ehm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ehm OCA], [https://pdbe.org/5ehm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ehm RCSB], [https://www.ebi.ac.uk/pdbsum/5ehm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ehm ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q8MS48_DROME Q8MS48_DROME] [https://www.uniprot.org/uniprot/Q9VDH5_DROME Q9VDH5_DROME]
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Phylogenetic analysis reveals AMPA, kainate, and NMDA receptor families in insect genomes, suggesting conserved functional properties corresponding to their vertebrate counterparts. However, heterologous expression of the Drosophila kainate receptor DKaiR1D and the AMPA receptor DGluR1A revealed novel ligand selectivity at odds with the classification used for vertebrate glutamate receptor ion channels (iGluRs). DKaiR1D forms a rapidly activating and desensitizing receptor that is inhibited by both NMDA and the NMDA receptor antagonist AP5; crystallization of the KaiR1D ligand-binding domain reveals that these ligands stabilize open cleft conformations, explaining their action as antagonists. Surprisingly, the AMPA receptor DGluR1A shows weak activation by its namesake agonist AMPA and also by quisqualate. Crystallization of the DGluR1A ligand-binding domain reveals amino acid exchanges that interfere with binding of these ligands. The unexpected ligand-binding profiles of insect iGluRs allows classical tools to be used in novel approaches for the study of synaptic regulation. VIDEO ABSTRACT.
-Authors: Dharkar, P., Mayer, M.L.
+Novel Functional Properties of Drosophila CNS Glutamate Receptors.,Li Y, Dharkar P, Han TH, Serpe M, Lee CH, Mayer ML Neuron. 2016 Dec 7;92(5):1036-1048. doi: 10.1016/j.neuron.2016.10.058. Epub 2016 , Nov 23. PMID:27889096<ref>PMID:27889096</ref>
-Description:
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
-[[Category: Dharkar, P]]
+<div class="pdbe-citations 5ehm" style="background-color:#fffaf0;"></div>
-[[Category: Mayer, M.L]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Drosophila melanogaster]]
+[[Category: Large Structures]]
+[[Category: Dharkar P]]
+[[Category: Mayer ML]]