4sbv: Difference between revisions

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==The REFINEMENT OF SOUTHERN BEAN MOSAIC VIRUS IN RECIPROCAL SPACE==
==The REFINEMENT OF SOUTHERN BEAN MOSAIC VIRUS IN RECIPROCAL SPACE==
<StructureSection load='4sbv' size='340' side='right' caption='[[4sbv]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='4sbv' size='340' side='right'caption='[[4sbv]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4sbv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sbmv Sbmv]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3sbv 3sbv], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2sbv 2sbv] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1sbv 1sbv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4SBV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4SBV FirstGlance]. <br>
<table><tr><td colspan='2'>[[4sbv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Southern_bean_mosaic_virus Southern bean mosaic virus]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3sbv 3sbv], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2sbv 2sbv] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1sbv 1sbv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4SBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4SBV FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4sbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4sbv OCA], [http://pdbe.org/4sbv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4sbv RCSB], [http://www.ebi.ac.uk/pdbsum/4sbv PDBsum]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4sbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4sbv OCA], [https://pdbe.org/4sbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4sbv RCSB], [https://www.ebi.ac.uk/pdbsum/4sbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4sbv ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CAPSD_SCPMV CAPSD_SCPMV]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sb/4sbv_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sb/4sbv_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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==See Also==
==See Also==
*[[Virus coat protein|Virus coat protein]]
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Sbmv]]
[[Category: Large Structures]]
[[Category: Rossmann, M G]]
[[Category: Southern bean mosaic virus]]
[[Category: Icosahedral virus]]
[[Category: Rossmann MG]]
[[Category: Virus]]

Latest revision as of 00:22, 29 June 2023

The REFINEMENT OF SOUTHERN BEAN MOSAIC VIRUS IN RECIPROCAL SPACEThe REFINEMENT OF SOUTHERN BEAN MOSAIC VIRUS IN RECIPROCAL SPACE

Structural highlights

4sbv is a 3 chain structure with sequence from Southern bean mosaic virus. This structure supersedes the now removed PDB entries 3sbv, 2sbv and 1sbv. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CAPSD_SCPMV

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

4sbv, resolution 2.80Å

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