8shi: Difference between revisions

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'''Unreleased structure'''


The entry 8shi is ON HOLD
==Valpha3S1 Vbeta13S1 HLA C 0602 VRSRRCLRL==
<StructureSection load='8shi' size='340' side='right'caption='[[8shi]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[8shi]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8SHI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8SHI FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9000173&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ABA:ALPHA-AMINOBUTYRIC+ACID'>ABA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8shi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8shi OCA], [https://pdbe.org/8shi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8shi RCSB], [https://www.ebi.ac.uk/pdbsum/8shi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8shi ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/F6IQM2_HUMAN F6IQM2_HUMAN]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Psoriasis is a chronic skin disease characterised by hyperproliferative epidermal lesions infiltrated by autoreactive T cells. Individuals expressing the Human Leukocyte antigen (HLA) C*06:02 allele are at highest risk for developing psoriasis. An autoreactive T cell clone (termed Valpha3S1/Vbeta13S1) isolated from psoriatic plaques is selective for HLA-C*06:02-presenting a peptide derived from the melanocyte-specific auto-antigen ADAMTSL5 (VRSRRCLRL). Here we determine the crystal structure of this psoriatic TCR-HLA-C*06:02- ADAMTSL5 complex with a stabilised peptide. Docking of the TCR involves an extensive complementary charge network formed between negatively charged TCR residues interleaving with exposed arginine residues from the self-peptide and the HLA-C*06:02 alpha1 helix. We probed these interactions through mutagenesis and activation assays. The charged interface spans the polymorphic region of the C1/C2 HLA group. Notably the peptide binding groove of HLA C*06:02 appears exquisitely suited for presenting highly charged Arg-rich epitopes recognised by this acidic psoriatic TCR. Overall, we provide a structural basis for understanding engagement of melanocyte antigen-presenting cells by a TCR implicated in psoriasis, while simultaneously expanding our knowledge of how TCRs engage HLA-C.


Authors: Littler, D.R., Anand, S., Vivian, J.P., Rossjohn, J.
Complimentary electrostatics dominate T Cell Receptor binding to a psoriasis-associated-peptide-antigen presented by Human Leukocyte Antigen (HLA) C*06:02.,Anand S, Littler DR, Mobbs JI, Braun A, Baker DG, Tennant L, Purcell AW, Vivian JP, Rossjohn J J Biol Chem. 2023 Jun 15:104930. doi: 10.1016/j.jbc.2023.104930. PMID:37330172<ref>PMID:37330172</ref>


Description: Valpha3S1 Vbeta13S1 HLA C 0602 VRSRRCLRL
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Anand, S]]
<div class="pdbe-citations 8shi" style="background-color:#fffaf0;"></div>
[[Category: Rossjohn, J]]
== References ==
[[Category: Vivian, J.P]]
<references/>
[[Category: Littler, D.R]]
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Anand S]]
[[Category: Littler DR]]
[[Category: Rossjohn J]]
[[Category: Vivian JP]]

Latest revision as of 00:22, 29 June 2023

Valpha3S1 Vbeta13S1 HLA C 0602 VRSRRCLRLValpha3S1 Vbeta13S1 HLA C 0602 VRSRRCLRL

Structural highlights

8shi is a 10 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.9000173Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

F6IQM2_HUMAN

Publication Abstract from PubMed

Psoriasis is a chronic skin disease characterised by hyperproliferative epidermal lesions infiltrated by autoreactive T cells. Individuals expressing the Human Leukocyte antigen (HLA) C*06:02 allele are at highest risk for developing psoriasis. An autoreactive T cell clone (termed Valpha3S1/Vbeta13S1) isolated from psoriatic plaques is selective for HLA-C*06:02-presenting a peptide derived from the melanocyte-specific auto-antigen ADAMTSL5 (VRSRRCLRL). Here we determine the crystal structure of this psoriatic TCR-HLA-C*06:02- ADAMTSL5 complex with a stabilised peptide. Docking of the TCR involves an extensive complementary charge network formed between negatively charged TCR residues interleaving with exposed arginine residues from the self-peptide and the HLA-C*06:02 alpha1 helix. We probed these interactions through mutagenesis and activation assays. The charged interface spans the polymorphic region of the C1/C2 HLA group. Notably the peptide binding groove of HLA C*06:02 appears exquisitely suited for presenting highly charged Arg-rich epitopes recognised by this acidic psoriatic TCR. Overall, we provide a structural basis for understanding engagement of melanocyte antigen-presenting cells by a TCR implicated in psoriasis, while simultaneously expanding our knowledge of how TCRs engage HLA-C.

Complimentary electrostatics dominate T Cell Receptor binding to a psoriasis-associated-peptide-antigen presented by Human Leukocyte Antigen (HLA) C*06:02.,Anand S, Littler DR, Mobbs JI, Braun A, Baker DG, Tennant L, Purcell AW, Vivian JP, Rossjohn J J Biol Chem. 2023 Jun 15:104930. doi: 10.1016/j.jbc.2023.104930. PMID:37330172[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Anand S, Littler DR, Mobbs JI, Braun A, Baker DG, Tennant L, Purcell AW, Vivian JP, Rossjohn J. Complimentary electrostatics dominate T Cell Receptor binding to a psoriasis-associated-peptide-antigen presented by Human Leukocyte Antigen (HLA) C*06:02. J Biol Chem. 2023 Jun 15:104930. PMID:37330172 doi:10.1016/j.jbc.2023.104930

8shi, resolution 2.90Å

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