2k17: Difference between revisions
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New page: '''Unreleased structure''' The entry 2k17 is ON HOLD until Paper Publication Authors: van Ingen, H., van Schaik, F.M.A., Wienk, H., Timmers, M., Boelens, R. Description: Solution struc... |
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==Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide== | |||
<StructureSection load='2k17' size='340' side='right'caption='[[2k17]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2k17]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K17 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K17 FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k17 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k17 OCA], [https://pdbe.org/2k17 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k17 RCSB], [https://www.ebi.ac.uk/pdbsum/2k17 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k17 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/TAF3_MOUSE TAF3_MOUSE] Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. Required in complex with TBPL2 for the differentiation of myoblasts into myocytes. The complex replaces TFIID at specific promoters at an early stage in the differentiation process.<ref>PMID:17704303</ref> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k1/2k17_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k17 ConSurf]. | |||
<div style="clear:both"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Mus musculus]] | |||
[[Category: Boelens R]] | |||
[[Category: Timmers M]] | |||
[[Category: Wienk H]] | |||
[[Category: Van Ingen H]] | |||
[[Category: Van Schaik FMA]] | |||
Latest revision as of 11:39, 14 June 2023
Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptideSolution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide
Structural highlights
FunctionTAF3_MOUSE Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. Required in complex with TBPL2 for the differentiation of myoblasts into myocytes. The complex replaces TFIID at specific promoters at an early stage in the differentiation process.[1] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. References
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