4xsq: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Structure of a variable lymphocyte receptor-like protein Bf66946 from Branchiostoma floridae==
-<StructureSection load='4xsq' size='340' side='right' caption='[[4xsq]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+<StructureSection load='4xsq' size='340' side='right'caption='[[4xsq]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4xsq]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XSQ FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4xsq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Branchiostoma_floridae Branchiostoma floridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XSQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XSQ FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xsq OCA], [https://pdbe.org/4xsq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xsq RCSB], [https://www.ebi.ac.uk/pdbsum/4xsq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xsq ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xsq OCA], [http://pdbe.org/4xsq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xsq RCSB], [http://www.ebi.ac.uk/pdbsum/4xsq PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/LRRCB_BRAFL LRRCB_BRAFL] Binds selectively to the Gram-positive bacteria S.aureus and S.pneumoniae. Does not adhere to the Gram-negative bacteria E.coli and S.enterica. Probably recognizes peptidoglycans expressed on the bacterial cell surface.<ref>PMID:26821753</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Cao, D D]]
+[[Category: Branchiostoma floridae]]
-[[Category: Chen, Y]]
+[[Category: Large Structures]]
-[[Category: Cheng, W]]
+[[Category: Cao DD]]
-[[Category: Jiang, Y L]]
+[[Category: Chen Y]]
-[[Category: Li, Q]]
+[[Category: Cheng W]]
-[[Category: Wang, W J]]
+[[Category: Jiang YL]]
-[[Category: Zhou, C Z]]
+[[Category: Li Q]]
-[[Category: Amphioxus]]
+[[Category: Wang WJ]]
-[[Category: Bf66946]]
+[[Category: Zhou CZ]]
-[[Category: Immune system]]
-[[Category: Leucine rich repeat]]
-[[Category: Variable lymphocyte receptor]]