Exonuclease 3D structures: Difference between revisions
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**[[3qea]], [[3qeb]], [[5v04]], [[5v05]], [[5v06]], [[5v0b]], [[5v0c]], [[5v0d]], [[5v0e]], [[5uzv]] - hExN-I + DNA - human<br /> | **[[3qea]], [[3qeb]], [[5v04]], [[5v05]], [[5v06]], [[5v0b]], [[5v0c]], [[5v0d]], [[5v0e]], [[5uzv]] - hExN-I + DNA - human<br /> | ||
**[[3qe9]], [[5v07]], [[5v08]], [[5v09]], [[5v0a]] – hExN-I (mutant) + DNA<br /> | **[[3qe9]], [[5v07]], [[5v08]], [[5v09]], [[5v0a]] – hExN-I (mutant) + DNA<br /> | ||
**[[5fiq]], [[5fis]] – ExN-I ExN domain – silkworm<br /> | |||
**[[1fxx]], [[3c95]] – EcExN-I – ''Escherichia coli''<br /> | **[[1fxx]], [[3c95]] – EcExN-I – ''Escherichia coli''<br /> | ||
**[[2qxf]] - EcExN-I + TMP<br /> | **[[2qxf]] - EcExN-I + TMP<br /> | ||
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**[[4jrp]], [[4jrq]], [[4js5]], [[4js4]], [[4hcc]], [[4hcb]] – EcExN-I + DNA<br /> | **[[4jrp]], [[4jrq]], [[4js5]], [[4js4]], [[4hcc]], [[4hcb]] – EcExN-I + DNA<br /> | ||
**[[4rg8]] – ExN-I (mutant) – ''Methylocaldum szegedienes''<br /> | **[[4rg8]] – ExN-I (mutant) – ''Methylocaldum szegedienes''<br /> | ||
*ExN-III | *ExN-III | ||
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*ExN-V or RecBCD | *ExN-V or RecBCD | ||
**[[7lw7]] – hExN-V (mutant) <br /> | |||
**[[7lw8]], [[7lw9]], [[7lwa]] – hExN-V (mutant) + DNA – Cryo EM<br /> | |||
**[[3e1s]] - EcExN-V RecD subunit<br /> | **[[3e1s]] - EcExN-V RecD subunit<br /> | ||
**[[1w36]], [[3k70]] – EcExN-V RecB+RecC+RecD subunits + DNA hairpin<br /> | **[[1w36]], [[3k70]] – EcExN-V RecB+RecC+RecD subunits + DNA hairpin<br /> | ||
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**[[3slp]], [[4wuz]] - BlExN λ + DNA<br /> | **[[3slp]], [[4wuz]] - BlExN λ + DNA<br /> | ||
**[[3sm4]] - BlExN λ (mutant) + DNA<br /> | **[[3sm4]] - BlExN λ (mutant) + DNA<br /> | ||
**[[6lpm]] - Dr5’-ExN III<br /> | |||
**[[3k93]] – ExN – Haemophilus somnus | **[[3k93]] – ExN – Haemophilus somnus | ||
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**[[5ght]] – TkExN – ''Thermococcus kodakarensis''<br /> | **[[5ght]] – TkExN – ''Thermococcus kodakarensis''<br /> | ||
**[[5ghs]], [[5ghr]] – TkExN + polypeptide<br /> | **[[5ghs]], [[5ghr]] – TkExN + polypeptide<br /> | ||
**[[7e15]] – TkExN + GINS51 + DNA polymerase II small subunit<br /> | |||
**[[5f54]] – DrExN + dTMP<br /> | **[[5f54]] – DrExN + dTMP<br /> | ||
**[[5f55]] – DrExN + DNA<br /> | **[[5f55]] – DrExN + DNA<br /> | ||
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**[[4yor]], [[4yot]], [[4you]] – PhExN phoexo I – ''Pyrococcus horikoshii''<br /> | **[[4yor]], [[4yot]], [[4you]] – PhExN phoexo I – ''Pyrococcus horikoshii''<br /> | ||
**[[4yov]], [[4yow]], [[4yox]], [[4yoy]] – PhExN phoexo I (mutant) + DNA<br /> | **[[4yov]], [[4yow]], [[4yox]], [[4yoy]] – PhExN phoexo I (mutant) + DNA<br /> | ||
**[[7t2s]] – EcExN <br /> | |||
*3’-5’ ExN oligoribonuclease (ORN) | |||
**[[3tr8]] – ORN – ''Coxiella burnetii''<br /> | |||
**[[5cy4]] – ORN – ''Acinetobacter baumannii''<br /> | |||
**[[6a4a]] – CpORN – ''Colwella psychrerythraea''<br /> | |||
**[[6a4d]] – CpORN (mutant) + PNP-TMP <br /> | |||
**[[6a4e]] – CpORN (mutant) + RNA<br /> | |||
**[[6a4f]] – CpORN + UMP <br /> | |||
**[[2gbz]] – ORN – ''Xanthomonas campestris''<br /> | |||
**[[1yta]], [[2igi]] – EcORN <br /> | |||
**[[1j9a]] – ORN – ''Haemophilus influenzae''<br /> | |||
**[[6n6a]], [[6n6c]], [[6n6d]], [[6n6e]] [[6n6f]], [[6n6g]], [[6n6h]] – ORN + RNA – ''Vibrio cholerae''<br /> | |||
*5’-3’ ExN | *5’-3’ ExN | ||
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*ExN Trex | *ExN Trex | ||
**[[7tqn]], [[7tqo]], [[7tqp]] - hExN Trex1 (mutant)<br /> | |||
**[[7tqq]] - hExN Trex1 + DNA<br /> | |||
**[[1y97]] – hExN Trex2<br /> | **[[1y97]] – hExN Trex2<br /> | ||
**[[2o4g]] - mExN Trex1 + nucleotide – mouse<br /> | **[[2o4g]] - mExN Trex1 + nucleotide – mouse<br /> | ||
**[[3mxj]] - mExN Trex1<br /> | **[[2ioc]], [[3mxj]] - mExN Trex1<br /> | ||
**[[6w10]] - mExN Trex1 (mutant)<br /> | |||
**[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br /> | **[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br /> | ||
**[[2oa8]], [[5ywv]], [[5ywu]], [[5ywt]], [[5yws]] - mExN Trex1 + DNA<br /> | **[[2oa8]], [[5ywv]], [[5ywu]], [[5ywt]], [[5yws]] - mExN Trex1 + DNA<br /> | ||
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**[[6a4b]], [[6a47]] - mExN Trex2 + DNA<br /> | **[[6a4b]], [[6a47]] - mExN Trex2 + DNA<br /> | ||
**[[6a46]] - mExN Trex2 + nucleotide<br /> | **[[6a46]] - mExN Trex2 + nucleotide<br /> | ||
*RNA ExN homolog or oligoribonuclease or REXO2 | |||
**[[6rci]] – hExN2<br /> | |||
**[[6j7y]] – hExN2 + DNA<br /> | |||
**[[6j80]], [[6rcn]] – hExN2 (mutant) + DNA<br /> | |||
**[[6n6i]], [[6n6j]], [[6n6k]], [[6rcl]], [[6sty]] – hExN2 + RNA<br /> | |||
**[[6j7z]] – hExN2 (mutant) + RNA<br /> | |||
*Other ExN | *Other ExN | ||
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**[[1zbu]] - hExn Eri1<br /> | **[[1zbu]] - hExn Eri1<br /> | ||
**[[1zbh]] - hExn Eri1 (mutant) + DNA<br /> | **[[1zbh]] - hExn Eri1 (mutant) + DNA<br /> | ||
**[[5aho]] – hExN Apollo<br /> | **[[5aho]], [[7b9b]] – hExN Apollo<br /> | ||
**[[7b2x]] – hExN Apollo (mutant)<br /> | |||
**[[7a1f]] – hExN Apollo + AMP<br /> | |||
**[[5zyw]] – hExN mitochondrial genome repair 1<br /> | **[[5zyw]] – hExN mitochondrial genome repair 1<br /> | ||
**[[5zyv]], [[5zyu]], [[5zyt]] – hExN mitochondrial genome repair 1 + DNA<br /> | **[[5zyv]], [[5zyu]], [[5zyt]] – hExN mitochondrial genome repair 1 + DNA<br /> | ||