4pt1: Difference between revisions
New page: '''Unreleased structure''' The entry 4pt1 is ON HOLD Authors: jiangge zheng, junru li, zhongzhou chen Description: Crystal structure of Locusta migratoria odorant binding proteins lmig... |
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==Crystal structure of Locusta migratoria odorant binding proteins lmigOBP1== | |||
<StructureSection load='4pt1' size='340' side='right'caption='[[4pt1]], [[Resolution|resolution]] 1.65Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[4pt1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Locusta_migratoria Locusta migratoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PT1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PT1 FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG0:2-(2-METHOXYETHOXY)ETHANOL'>PG0</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pt1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pt1 OCA], [https://pdbe.org/4pt1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pt1 RCSB], [https://www.ebi.ac.uk/pdbsum/4pt1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pt1 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q3HM32_LOCMI Q3HM32_LOCMI] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Locusta migratoria (Lmig) causes enormous losses to agricultural products, especially because it often infests the world with great swarms as locust plagues. Locusts find their plant hosts on which they feed through their olfactory system, in which odorant binding proteins (OBPs) play an important role. Previous study indicated that the amino acid sequences of LmigOBP showed low similarity to OBPs from other insect orders and we speculated that it might perform unique binding behavior. Here, we solved the first LmigOBP1 structure at 1.65A, which is a monomer in solution and disulfide bonds play a key role in maintaining its function. We show that LmigOBP1 possesses a unique seventh alpha-helix, which is located at the surface with strong interactions with the LmigOBP1 scaffold consisting of other six alpha-helices. Moreover, the seventh alpha-helix forms a wall of an "L" shaped internal hydrophobic cavity to accommodate linear ligands, which is consistent with the binding experiments. We also demonstrate that the ligand-binding pocket in LmigOBP1 is greatly different from that in the closest homologs mosquito OBPs. Taken together, this study provides a structural basis for designing small inhibitors to control locust. | |||
Crystal structure of the Locusta migratoria odorant binding protein.,Zheng J, Li J, Han L, Wang Y, Wu W, Qi X, Tao Y, Zhang L, Zhang Z, Chen Z Biochem Biophys Res Commun. 2014 Dec 15. pii: S0006-291X(14)02214-1. doi:, 10.1016/j.bbrc.2014.12.048. PMID:25522876<ref>PMID:25522876</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 4pt1" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[Odorant binding protein 3D structures|Odorant binding protein 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Locusta migratoria]] | |||
[[Category: Chen Z]] | |||
[[Category: Li J]] | |||
[[Category: Zheng J]] | |||
Latest revision as of 10:29, 8 February 2023
Crystal structure of Locusta migratoria odorant binding proteins lmigOBP1Crystal structure of Locusta migratoria odorant binding proteins lmigOBP1
Structural highlights
FunctionPublication Abstract from PubMedLocusta migratoria (Lmig) causes enormous losses to agricultural products, especially because it often infests the world with great swarms as locust plagues. Locusts find their plant hosts on which they feed through their olfactory system, in which odorant binding proteins (OBPs) play an important role. Previous study indicated that the amino acid sequences of LmigOBP showed low similarity to OBPs from other insect orders and we speculated that it might perform unique binding behavior. Here, we solved the first LmigOBP1 structure at 1.65A, which is a monomer in solution and disulfide bonds play a key role in maintaining its function. We show that LmigOBP1 possesses a unique seventh alpha-helix, which is located at the surface with strong interactions with the LmigOBP1 scaffold consisting of other six alpha-helices. Moreover, the seventh alpha-helix forms a wall of an "L" shaped internal hydrophobic cavity to accommodate linear ligands, which is consistent with the binding experiments. We also demonstrate that the ligand-binding pocket in LmigOBP1 is greatly different from that in the closest homologs mosquito OBPs. Taken together, this study provides a structural basis for designing small inhibitors to control locust. Crystal structure of the Locusta migratoria odorant binding protein.,Zheng J, Li J, Han L, Wang Y, Wu W, Qi X, Tao Y, Zhang L, Zhang Z, Chen Z Biochem Biophys Res Commun. 2014 Dec 15. pii: S0006-291X(14)02214-1. doi:, 10.1016/j.bbrc.2014.12.048. PMID:25522876[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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