3f6t: Difference between revisions

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[[Image:3f6t.jpg|left|200px]]


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==Crystal structure of aspartate aminotransferase (E.C. 2.6.1.1) (YP_194538.1) from Lactobacillus acidophilus NCFM at 2.15 A resolution==
The line below this paragraph, containing "STRUCTURE_3f6t", creates the "Structure Box" on the page.
<StructureSection load='3f6t' size='340' side='right'caption='[[3f6t]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3f6t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_acidophilus_NCFM Lactobacillus acidophilus NCFM]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F6T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F6T FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f6t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f6t OCA], [https://pdbe.org/3f6t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f6t RCSB], [https://www.ebi.ac.uk/pdbsum/3f6t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f6t ProSAT], [https://www.topsan.org/Proteins/JCSG/3f6t TOPSAN]</span></td></tr>
{{STRUCTURE_3f6t| PDB=3f6t |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5FIG7_LACAC Q5FIG7_LACAC]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f6/3f6t_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f6t ConSurf].
<div style="clear:both"></div>


===Crystal structure of aspartate aminotransferase (E.C. 2.6.1.1) (YP_194538.1) from Lactobacillus acidophilus NCFM at 2.15 A resolution===
==See Also==
 
*[[Aspartate aminotransferase 3D structures|Aspartate aminotransferase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3F6T is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus_ncfm Lactobacillus acidophilus ncfm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F6T OCA].
[[Category: Lactobacillus acidophilus NCFM]]
[[Category: Aspartate transaminase]]
[[Category: Large Structures]]
[[Category: Lactobacillus acidophilus ncfm]]
[[Category: JCSG, Joint Center for Structural Genomics.]]
[[Category: Aminotransferase]]
[[Category: Jcsg]]
[[Category: Joint center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transferase]]
[[Category: Yp_194538 1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 10 15:09:03 2008''

Latest revision as of 14:36, 1 February 2023

Crystal structure of aspartate aminotransferase (E.C. 2.6.1.1) (YP_194538.1) from Lactobacillus acidophilus NCFM at 2.15 A resolutionCrystal structure of aspartate aminotransferase (E.C. 2.6.1.1) (YP_194538.1) from Lactobacillus acidophilus NCFM at 2.15 A resolution

Structural highlights

3f6t is a 2 chain structure with sequence from Lactobacillus acidophilus NCFM. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5FIG7_LACAC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3f6t, resolution 2.15Å

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