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| <StructureSection load='1g5y' size='350' side='right' caption='Structure of human retinoid X receptor α ligand-binding domain tetramer complex with retinoid (PDB entry [[1g5y]])' scene=''> | | <StructureSection load='' size='350' side='right' caption='Structure of human retinoid X receptor α ligand-binding domain complex with 9-cis retinoic acid (PDB entry [[1fby]])' scene='51/516465/Cv/1'> |
| | __TOC__ |
| == Function == | | == Function == |
| '''Retinoid X receptor''' (RXR) is a nuclear receptor activated by 9-''cis'' retinoic acid. RXR makes a heterodimer with subfamily 1 nuclear receptors including retinoic acid receptor (RAR). In the absence of ligand, the RAR/RXR complex binds the hormone response elements complexed with corepressor protein. Upon binding of the ligand, the corepressor disassociates from the receptor and associates with the coactivator leading to transcription activation. RXR contains a DNA-binding domain (DBD) and ligand-binding domain (LBD)<ref>PMID:22020178</ref>. For additional details on RXR-α see [[RA Mediated T-reg Differentiation]]. | | '''Retinoid X receptor''' (RXR) is a [[Nuclear receptors|nuclear receptor]] activated by 9-''cis'' retinoic acid. RXR makes a heterodimer with subfamily 1 nuclear receptors including [[Retinoic acid receptor|retinoic acid receptor]] (RAR). In the absence of ligand, the RAR/RXR complex binds the hormone response elements complexed with corepressor protein. Upon binding of the ligand, the corepressor disassociates from the receptor and associates with the coactivator leading to transcription activation. RXR contains a DNA-binding domain (DBD) and ligand-binding domain (LBD)<ref>PMID:22020178</ref>. For additional details on RXR-α see [[RA Mediated T-reg Differentiation]]. |
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| | See also [[Intracellular receptors]] |
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| There are 3 classes of RXR: α, β and γ. <br /> | | There are 3 classes of RXR: α, β and γ. <br /> |
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| == Relevance == | | == Relevance == |
| *RXRγ is involved in working memory and despair behavior<ref>PMID:21334601</ref>. RXR pathway is a positive regulator of myelin debris clearance and has a role in age-related decline in remyelination<ref>PMID:2463675</ref>. <br />
| | RXRγ is involved in working memory and despair behavior<ref>PMID:21334601</ref>. RXR pathway is a positive regulator of myelin debris clearance and has a role in age-related decline in remyelination<ref>PMID:26463675</ref>. <br /> |
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| == Structural highlights == | | == Structural highlights == |
| | <scene name='51/516465/Cv/4'>9-cis retinoid acid binds to RXRα LBD in a hydrophobic pocket</scene>. {{Template:ColorKey_Hydrophobic}}, {{Template:ColorKey_Polar}}. Water molecules are shown as red spheres. <scene name='51/516465/Cv/5'>9-cis retinoid acid is in a hydrophobic pocket</scene>. The ligand-binding residues are conserved in the 3 classes of RXR |
| | <ref>PMID:10835357</ref>. |
| | ==3D structures of retinoid X receptor== |
| | [[Retinoid X receptor 3D structures]] |
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| <ref>PMID:12906827</ref>
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| </StructureSection> | | </StructureSection> |
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| ==3D structures of retinoid X receptor==
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| Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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| {{#tree:id=OrganizedByTopic|openlevels=0|
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| *Retinoid X receptor α
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| **[[3nsp]], [[1lbd]], [[1g1u]] - hRXR LBD – human<br />
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| **[[1rxr]] – hRXR DBD (mutant) – NMR<br />
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| **[[2q60]] – RXR LBD – ''Polyandrocarpa misakiensis''<br />
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| **[[1by4]] – hRXR + DNA<br />
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| **[[1g5y]] - hRXR LBD + retinoid<br />
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| **[[1dkf]] – mRXR LBD + mRAR LBD – mouse<br />
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| **[[1dsz]] - hRXR LBD + hRAR LBD + DNA<br />
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| **[[1fby]] - hRXR LBD + 9-''cis'' retinoic acid<br />
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| **[[3nsq]] - hRXR LBD + antagonist<br />
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| **[[3a9e]] - hRXR LBD + hRAR LBD + coactivator peptide<br />
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| **[[3fug]] - hRXR LBD + coactivator peptide<br />
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| **[[3fc6]] – hRXR LBD + NR1H3 protein<br />
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| **[[3r29]] - hRXR LBD + corepressor peptide SMRT2<br />
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| **[[3r2a]] - hRXR LBD + corepressor peptide SMRT2 + antagonist<br />
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| **[[3h0a]], [[1fm6]], [[1fm9]], [[1k74]] - hRXR LBD + PPAR-γ + 9-''cis'' retinoic acid + coactivator peptide<br />
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| **[[1rdt]] - hRXR LBD + PPAR-γ + coactivator peptide<br />
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| **[[3dzu]], [[3dzy]], [[3e00]] - hRXR LBD + PPAR-γ + 9-''cis'' retinoic acid + coactivator peptide + DNA<br />
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| **[[3oap]] - hRXR LBD + 9-''cis'' retinoic acid + coactivator peptide<br />
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| **[[3uvv]] - hRXR LBD + 9-''cis'' retinoic acid + thyronine + thyroid hormone receptor α<br />
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| **[[3ozj]] - hRXR LBD + bigelovin + coactivator peptide<br />
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| **[[3pcu]] - hRXR LBD + rutamarin + coactivator peptide<br />
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| **[[2zxz]], [[2zy0]], [[3r5m]], [[1mzn]], [[1mv9]], [[1mvc]], [[4k4j]], [[4k6i]], [[4m8e]], [[4m8h]] - hRXR LBD + agonist + coactivator peptide<br />
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| **[[2acl]] - hRXR LBD + agonist + oxysterols receptor α<br />
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| **[[4ozr]], [[4ozt]] - hRXR LBD + ecdysone receptor <br />
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| **[[3fal]] - hRXR LBD + modulator + oxysterols receptor α + 9-''cis'' retinoic acid<br />
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| **[[4n5g]], [[4n8r]] - hRXR LBD + modulator <br />
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| **[[3kwy]] - hRXR LBD + triphenyltin + coactivator peptide<br />
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| **[[3e94]] - hRXR LBD + tributylin + coactivator peptide<br />
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| **[[2p1t]], [[2p1u]], [[2p1v]] - hRXR LBD + retinoid + coactivator peptide<br />
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| **[[4oc7]] - hRXR LBD + acrylic acid derivative + coactivator peptide<br />
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| **[[4poh]], [[4poj]], [[4pp3]], [[4pp5]] - hRXR LBD + trienoic acid derivative + coactivator peptide<br />
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| **[[1xls]] - hRXR LBD (mutant) + orphan nuclear receptor NR1I3 + coactivator peptide<br />
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| **[[1xv9]] - hRXR LBD + orphan nuclear receptor NR1I3 + pregnane + coactivator peptide<br />
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| **[[1xvp]] - hRXR LBD + orphan nuclear receptor NR1I3 + CITCO + coactivator peptide<br />
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| **[[4j5w]] - hRXR LBD + orphan nuclear receptor PXR<br />
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| **[[4j5x]] - hRXR LBD + orphan nuclear receptor PXR + phosphonic acid derivative<br />
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| **[[4cn2]], [[4cn3]], [[4cn5]], [[4cn7]] - hRXR DBD + DNA <br />
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| **[[1r0n]], [[1ynw]] - hRXR DBD + DR3 response element + vitamin D3 receptor <br />
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| **[[4nqa]] - hRXR DBD + DR4 response element + liver X nuclear receptor + coactivator peptide <br />
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| *Retinoid X receptor β
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| **[[1xdk]] - mRXR LBD + mRAR LBD + thyroid receptor associated protein<br />
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| **[[1uhl]] - hRXR LBD + oxysterols receptor α + coactivator peptide<br />
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| **[[1h9u]] – hRXR LBD + agonist
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| *Retinoid X receptor γ
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| **[[2gl8]] – hRXR LBD
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| }}
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| == References == | | == References == |
| <references/> | | <references/> |
| [[Category:Topic Page]] | | [[Category:Topic Page]] |