Reverse Krebs cycle: Difference between revisions

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New page: <StructureSection load='3pff' size='350' side='right' scene='47/477091/Cv/1' caption='ATP-citrate synthase complex with ADP (stick model), tartrate and Mg+2 ions (green), 3pff'> This i...
 
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<StructureSection load='3pff' size='350' side='right' scene='47/477091/Cv/1' caption='ATP-citrate synthase complex with ADP (stick model), tartrate and Mg+2 ions (green), [[3pff]]'>
<StructureSection load='3pff' size='350' side='right' scene='47/477091/Cv/1' caption='ATP-citrate synthase complex with ADP (stick model), tartrate and Mg+2 ions (green), [[3pff]]'>
This is a default text for your page '''Reverse Krebs cycle'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
The reverse Krebs cycle (also known as the reverse tricarboxylic acid cycle, the reverse TCA cycle, or the reverse citric acid cycle, or the reductive tricarboxylic acid cycle, or the reductive TCA cycle) is a sequence of chemical reactions that are used by some bacteria to produce carbon compounds from carbon dioxide and water by the use of energy-rich reducing agents as electron donors. See also [https://en.wikipedia.org/wiki/Biological_carbon_fixation], [https://en.wikipedia.org/wiki/Reverse_Krebs_cycle], and [[Carbon Fixation]].
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.


== Function ==
The cycle involves the biosynthesis of <scene name='43/430893/Cv/2'>Acetyl-CoA</scene> from two molecules of CO2. The key steps of the reverse Krebs cycle are:


== Disease ==
* <scene name='43/430893/Cv/3'>Oxaloacetate</scene> to <scene name='43/430893/Cv/12'>malate</scene>, using NADH + H+


== Relevance ==
Oxaloacetate + NADH/H+ -> Malate + NAD+


== Structural highlights ==
*<scene name='43/430893/Cv/11'>Fumarate</scene> to <scene name='43/430893/Cv/10'>succinate</scene>, catalyzed by an [[oxidoreductase]], Fumarate reductase (''e.g.'' [[1d4c]]).


This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
Fumarate + FADH2 <=> Succinate + FAD


*Succinate to <scene name='43/430893/Cv/9'>Succinyl-CoA</scene>, an ATP dependent step
Succinate + ATP + CoA -> Succinyl-CoA + ADP + Pi
*<scene name='43/430893/Cv/8'>α-Ketoglutarate</scene> to <scene name='43/430893/Cv/6'>isocitrate</scene>, using NADPH + H+ and another molecule of CO2
α-Ketoglutarate + CO2 + NAD(P)H/H+ -> Isocitrate + NAD(P)+
*<scene name='43/430893/Cv/4'>Citrate</scene> converted into <scene name='43/430893/Cv/3'>oxaloacetate</scene> and acetyl-CoA, this is an ATP dependent step and the key enzyme is the [[ATP-citrate synthase|ATP citrate lyase]].
Citrate + ATP + CoA -> Oxaloacetate + Acetyl-CoA + ADP + Pi
This pathway is cyclic due to the regeneration of the oxaloacetate.
</StructureSection>
</StructureSection>
== References ==
== References ==
<references/>
<references/>

Latest revision as of 16:56, 5 January 2023

The reverse Krebs cycle (also known as the reverse tricarboxylic acid cycle, the reverse TCA cycle, or the reverse citric acid cycle, or the reductive tricarboxylic acid cycle, or the reductive TCA cycle) is a sequence of chemical reactions that are used by some bacteria to produce carbon compounds from carbon dioxide and water by the use of energy-rich reducing agents as electron donors. See also [1], [2], and Carbon Fixation.

The cycle involves the biosynthesis of from two molecules of CO2. The key steps of the reverse Krebs cycle are:

  • to , using NADH + H+

Oxaloacetate + NADH/H+ -> Malate + NAD+

Fumarate + FADH2 <=> Succinate + FAD

  • Succinate to , an ATP dependent step

Succinate + ATP + CoA -> Succinyl-CoA + ADP + Pi

  • to , using NADPH + H+ and another molecule of CO2

α-Ketoglutarate + CO2 + NAD(P)H/H+ -> Isocitrate + NAD(P)+

  • converted into and acetyl-CoA, this is an ATP dependent step and the key enzyme is the ATP citrate lyase.

Citrate + ATP + CoA -> Oxaloacetate + Acetyl-CoA + ADP + Pi

This pathway is cyclic due to the regeneration of the oxaloacetate.


ATP-citrate synthase complex with ADP (stick model), tartrate and Mg+2 ions (green), 3pff

Drag the structure with the mouse to rotate

ReferencesReferences

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Alexander Berchansky