4mv2: Difference between revisions

New page: {{STRUCTURE_4mv2| PDB=4mv2 | SCENE= }} ===Crystal structure of plu4264 protein from Photorhabdus luminescens=== ==About this Structure== 4mv2 is a 2 chain structure with sequence...
 
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_4mv2|  PDB=4mv2  |  SCENE=  }}
===Crystal structure of plu4264 protein from Photorhabdus luminescens===


==About this Structure==
==Crystal structure of plu4264 protein from Photorhabdus luminescens==
[[4mv2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Photorhabdus_luminescens_subsp._laumondii_tto1 Photorhabdus luminescens subsp. laumondii tto1]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4i4a 4i4a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MV2 OCA].  
<StructureSection load='4mv2' size='340' side='right'caption='[[4mv2]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
[[Category: Photorhabdus luminescens subsp. laumondii tto1]]
== Structural highlights ==
[[Category: Babnigg, G.]]
<table><tr><td colspan='2'>[[4mv2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Photorhabdus_laumondii_subsp._laumondii_TTO1 Photorhabdus laumondii subsp. laumondii TTO1]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4i4a 4i4a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MV2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MV2 FirstGlance]. <br>
[[Category: Bingman, C A.]]
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
[[Category: Jedrzejczak, R.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mv2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mv2 OCA], [https://pdbe.org/4mv2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mv2 RCSB], [https://www.ebi.ac.uk/pdbsum/4mv2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mv2 ProSAT]</span></td></tr>
[[Category: Joachimiak, A.]]
</table>
[[Category: Li, H.]]
== Function ==
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[https://www.uniprot.org/uniprot/Q7MZL9_PHOLL Q7MZL9_PHOLL]  
[[Category: Michalska, K.]]
<div style="background-color:#fffaf0;">
[[Category: NatPro, Enzyme Discovery for Natural Product Biosynthesis.]]
== Publication Abstract from PubMed ==
[[Category: Phillips, G N.]]
Proteins belonging to the cupin superfamily have a wide range of catalytic and non-catalytic functions. Cupin proteins commonly have the capacity to bind a metal ion with the metal frequently determining the function of the protein. We have been investigating the function of homologous cupin proteins that are conserved in more than 40 species of bacteria. To gain insights into the potential function of these proteins we have solved the structure of Plu4264 from Photorhabdus luminescens TTO1 at a resolution of 1.35 A and identified manganese as the likely natural metal ligand of the protein. (c) Proteins 2014;. (c) 2014 Wiley Periodicals, Inc.
[[Category: Thomas, M G.]]
 
[[Category: Weerth, S.]]
Structure of a cupin protein Plu4264 from Photorhabdus luminescens subsp. laumondii TTO1 at 1.35 A resolution.,Weerth RS, Michalska K, Bingman CA, Yennamalli RM, Li H, Jedrzejczak R, Wang F, Babnigg G, Joachimiak A, Thomas MG, Phillips GN Proteins. 2014 Oct 30. doi: 10.1002/prot.24705. PMID:25354690<ref>PMID:25354690</ref>
[[Category: Yennamalli, R.]]
 
[[Category: Cupin]]
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Enzyme discovery for natural product biosynthesis]]
</div>
[[Category: Mcsg]]
<div class="pdbe-citations 4mv2" style="background-color:#fffaf0;"></div>
[[Category: Midwest center for structural genomic]]
== References ==
[[Category: Natpro]]
<references/>
[[Category: Psi-biology]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Unknown function]]
[[Category: Large Structures]]
[[Category: Photorhabdus laumondii subsp. laumondii TTO1]]
[[Category: Babnigg G]]
[[Category: Bingman CA]]
[[Category: Jedrzejczak R]]
[[Category: Joachimiak A]]
[[Category: Li H]]
[[Category: Michalska K]]
[[Category: Phillips Jr GN]]
[[Category: Thomas MG]]
[[Category: Weerth S]]
[[Category: Yennamalli R]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA