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Glyceraldehyde-3-phosphate dehydrogenase 3D structures: Difference between revisions

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Line 13: Line 13:
**[[4iq8]] - GAPDH – yeast<br />
**[[4iq8]] - GAPDH – yeast<br />
**[[1vsu]] – CpGAPDH – ''Cryptosporidium parvum''<br />
**[[1vsu]] – CpGAPDH – ''Cryptosporidium parvum''<br />
**[[1dc5]], [[1s7c]], [[5o0v]], [[6io4]], [[6utm]], [[6utn]], [[6uto]] - EcGAPDH – ''Escherichia coli''<br />
**[[1dc5]], [[1s7c]], [[5o0v]], [[6utm]], [[6utn]], [[6uto]] - EcGAPDH – ''Escherichia coli''<br />
**[[6io4]], [[6io6]], [[6ioj]] - EcGAPDH (mutant) <br />
**[[6io4]], [[6io6]], [[6ioj]] - EcGAPDH (mutant) <br />
**[[1euh]], [[1qi6]] - SmGAPDH – ''Streptococcus mutans''<br />
**[[1euh]], [[1qi6]] - SmGAPDH – ''Streptococcus mutans''<br />
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**[[5v8y]], [[5v8x]] - SagGAPDH (mutant) <br />
**[[5v8y]], [[5v8x]] - SagGAPDH (mutant) <br />
**[[6iqv]] - LpGAPDH – ''Lactobacillus plantarum''<br />
**[[6iqv]] - LpGAPDH – ''Lactobacillus plantarum''<br />
**[[7d1g]] - GAPDH – ''Clostridium beijerinckii''<br />
**[[7jh0]] - GAPDH – ''Schistosoma mansoni''<br />


*NAD-dependent GAPDH with cofactor NAD
*NAD-dependent GAPDH with cofactor NAD
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**[[3gpd]], [[1znq]], [[1u8f]], [[5c7o]], [[4wnc]], [[3pfw]] - hGAPDH + NAD <br />
**[[3gpd]], [[1znq]], [[1u8f]], [[5c7o]], [[4wnc]], [[3pfw]] - hGAPDH + NAD <br />
**[[4wni]], [[6ade]] - hGAPDH (mutant) + NAD<br />
**[[4wni]], [[6ade]] - hGAPDH (mutant) + NAD<br />
**[[6m61]] - hGAPDH + NAD + inhibitor<br />
**[[5ddi]] - pGAPDH + NAD – pig<br />
**[[5ddi]] - pGAPDH + NAD – pig<br />
**[[4o63]], [[4o59]] - bGAPDH + NAD – bovine<br />
**[[4o63]], [[4o59]] - bGAPDH + NAD – bovine<br />
**[[1j0x]] - GAPDH + NAD – rabbit<br />
**[[1j0x]] - GAPDH + NAD – rabbit<br />
**[[2vyn]], [[2vyv]] - GAPDH + NAD - rat<br />
**[[2vyn]], [[2vyv]] - GAPDH + NAD - rat<br />
**[[6lgj]] - mGAPDH + NAD <br />
**[[6lgk]] - mGAPDH (mutant) + NAD <br />
**[[6lgm]] - mGAPDH + NAD + inhibitor<br />
**[[1ihx]] – scsGAPDH + NAD derivative – South China Sea lobster<br />
**[[1ihx]] – scsGAPDH + NAD derivative – South China Sea lobster<br />
**[[1gpd]], [[1szj]], [[1dss]]  – AlGAPDH + NAD <br />
**[[1gpd]], [[1szj]], [[1dss]]  – AlGAPDH + NAD <br />
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**[[1gyq]] - LmGAPDH + benzyl-NAD<br />
**[[1gyq]] - LmGAPDH + benzyl-NAD<br />
**[[1cer]], [[2g82]] - GAPDH + NAD – ''Thermus aquaticus''<br />
**[[1cer]], [[2g82]] - GAPDH + NAD – ''Thermus aquaticus''<br />
**[[1gad]], [[1dc6]], [[4mvj]] - EcGAPDH + NAD<br />
**[[1gad]], [[1dc6]], [[4mvj]], [[7c5f]] - EcGAPDH + NAD<br />
**[[1gae]] - EcGAPDH (mutant) + NAD<br />
**[[1gae]] - EcGAPDH (mutant) + NAD<br />
**[[2ep7]] – GAPDH + NAD – ''Aquifex aeolicus''<br />
**[[2ep7]] – GAPDH + NAD – ''Aquifex aeolicus''<br />
Line 76: Line 82:
**[[5ld5]] - GAPDH + NAD – ''Atopobium vaginae''<br />
**[[5ld5]] - GAPDH + NAD – ''Atopobium vaginae''<br />
**[[4lsm]] - TcGAPDH  + NAD – ''Trypanosoma cruzi''<br />
**[[4lsm]] - TcGAPDH  + NAD – ''Trypanosoma cruzi''<br />
**[[6ok4]] - GAPDH + NAD – ''Chlamydia trachomatis''<br />
**[[6ok4]], [[6wyc]], [[6x2e]] - GAPDH + NAD – ''Chlamydia trachomatis''<br />
**[[6nlx]] - GAPDH + NAD – ''Naegleria fowleri''<br />
**[[6nlx]] - GAPDH + NAD – ''Naegleria fowleri''<br />
**[[6iqm]] - LpGAPDH + NAD<br />
**[[6iqm]] - LpGAPDH + NAD<br />
**[[6fzi]] - GAPDH + NAD – ''Clostridium perfringens''<br />
**[[6fzi]] - GAPDH + NAD – ''Clostridium perfringens''<br />
**[[6fzh]], [[6ite]] - GAPDH + NAD – ''Streptococcus pyogenes''<br />
**[[6fzh]], [[6ite]] - GAPDH + NAD – ''Streptococcus pyogenes''<br />
**[[6dfz]] - GAPDH + NAD – ''Acropora millepora''<br />
**[[6px2]] - GAPDH + NAD – ''Acropora millepora''<br />
**[[7jwk]] - GAPDH + NAD – ''Mycoplasma genitalium''<br />


*NAD-dependent GAPDH ternary complexes containing glyceraldehyde-3-phosphate (G3P)
*NAD-dependent GAPDH ternary complexes containing glyceraldehyde-3-phosphate (G3P)
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**[[6gfp]] - SeGAPDH + NAD + NADP <br />
**[[6gfp]] - SeGAPDH + NAD + NADP <br />
**[[6gve]] - SeGAPDH + NAD + CP12 + phosphoribulokinase<br />
**[[6gve]] - SeGAPDH + NAD + CP12 + phosphoribulokinase<br />
**[[6kev]] - SeGAPDH + ATP + G6P <br />
**[[3qv1]] - AtGAPDH + NAD + CP12 <br />
**[[3qv1]] - AtGAPDH + NAD + CP12 <br />
**[[1i33]], [[1i32]] - LmGAPDH  + inhibitor<br />
**[[1i33]], [[1i32]] - LmGAPDH  + inhibitor<br />

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Michal Harel, Joel L. Sussman
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