User:Eric Martz/Virus capsid visualization resources: Difference between revisions

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* [[Image:Starf-18px.png]] [[Hiv-1 gag|Gag of HIV-1]]

* [[Gag polyprotein]], part of the capsid of HIV and other retroviruses.

* HIV: [[Human Immunodeficiency Virus]] has a list of links to more than 20 related articles in Proteopedia.

* [[Image:Starf-18px.png]] Human papilloma virus: [[Major capsid protein L1|HPV major capsid protein L1]], basis for the Gardasil 9 vaccine.

* [[Human rhinovirus|Rhinovirus, human]]

* [[Ann Taylor/sandbox Norovirus oligosaccaride binding|Norovirus oligosaccaride binding]]

* [[Image:Star-18px.png]] [[Journal:PLoS_ONE:1|Polio virus capsid]]

* [[SV40 Capsid Simplified]]

* [[SV40 Capsid Simplified]] overlays the capsid with its geometric icosahedron.

* [[Tobacco Mosaic Virus]]

* [[Image:Star-18px.png]] [[Tobacco Mosaic Virus]]

* [[Viral capsids]] ***

* [[Virus coat protein]]

* [[Virus coat proteins 3D structures]]

* [[Art:Zika virus|Zika virus -- Art]]

* [[Hugo Heringer de Almeida/5YGH|Zika virus capsid protein]]

*** Needs further examination. ~~All entries need evaluation for stars~~.

*** Needs further examination.

==Lists of Links==

* HIV: [[Human Immunodeficiency Virus]] has a list of links to more than 20 related articles in Proteopedia.

* [[Virus coat proteins 3D structures]]

==External Virus Capsid Resources==

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** [https://pdb101.rcsb.org/learn/paper-models Paper models of viruses] can be constructed using instructions provided.

** [https://pdb101.rcsb.org/motm/200 Quasisymmetry in Icosahedral Viruses] explains how icosahedral capsids of different sizes assemble from copies of a single subunit protein chain, and explains triangulation numbers with examples.

* [https://viperdb.scripps.edu/ VIPERdb / VIrus Particle ExploreR database] includes:

** Static images of virus capsids organized by taxa.

* The [https://viralzone.expasy.org/885 Virion Section] of the [https://viralzone.expasy.org/ ViralZone] offers schematics for triangulation numbers with links to virus taxa, UniProt, etc. See also [https://viralzone.expasy.org/750 Browse by Virion].

@@ Line 7: / Line 7: @@
 * [[Image:Starf-18px.png]] [[Hiv-1 gag|Gag of HIV-1]]
 * [[Gag polyprotein]], part of the capsid of HIV and other retroviruses.
-* HIV: [[Human Immunodeficiency Virus]] has a list of links to more than 20 related articles in Proteopedia.
 * [[Image:Starf-18px.png]] Human papilloma virus: [[Major capsid protein L1|HPV major capsid protein L1]], basis for the Gardasil 9 vaccine.
 * [[Human rhinovirus|Rhinovirus, human]]
 * [[Ann Taylor/sandbox Norovirus oligosaccaride binding|Norovirus oligosaccaride binding]]
 * [[Image:Star-18px.png]] [[Journal:PLoS_ONE:1|Polio virus capsid]]
-* [[SV40 Capsid Simplified]]
+* [[SV40 Capsid Simplified]] overlays the capsid with its geometric icosahedron.
-* [[Tobacco Mosaic Virus]]
+* [[Image:Star-18px.png]] [[Tobacco Mosaic Virus]]
 * [[Viral capsids]] ***
 * [[Virus coat protein]]
-* [[Virus coat proteins 3D structures]]
 * [[Art:Zika virus|Zika virus -- Art]]
 * [[Hugo Heringer de Almeida/5YGH|Zika virus capsid protein]]
-  *** Needs further examination. All entries need evaluation for stars.
+  *** Needs further examination.
+==Lists of Links==
+* HIV: [[Human Immunodeficiency Virus]] has a list of links to more than 20 related articles in Proteopedia.
+* [[Virus coat proteins 3D structures]]
 ==External Virus Capsid Resources==
@@ Line 30: / Line 32: @@
 ** [https://pdb101.rcsb.org/learn/paper-models Paper models of viruses] can be constructed using instructions provided.
 ** [https://pdb101.rcsb.org/motm/200 Quasisymmetry in Icosahedral Viruses] explains how icosahedral capsids of different sizes assemble from copies of a single subunit protein chain, and explains triangulation numbers with examples.
+* [https://viperdb.scripps.edu/ VIPERdb / VIrus Particle ExploreR database] includes:
+** Static images of virus capsids organized by taxa.
 * The [https://viralzone.expasy.org/885 Virion Section] of the [https://viralzone.expasy.org/ ViralZone] offers schematics for triangulation numbers with links to virus taxa, UniProt, etc. See also [https://viralzone.expasy.org/750 Browse by Virion].