3eer: Difference between revisions

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-[[Image:3eer.png|left|200px]]
-{{STRUCTURE_3eer|  PDB=3eer  |  SCENE=  }}
+==High resolution structure of putative organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961==
+<StructureSection load='3eer' size='340' side='right'caption='[[3eer]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
-===High resolution structure of putative organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3eer]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EER OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EER FirstGlance]. <br>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-==About this Structure==
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[3eer]] is a 1 chain structure of [[Organic hydroperoxide resistance protein]] with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_el_tor Vibrio cholerae o1 biovar el tor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EER OCA].
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VC_A1006 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eer FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eer OCA], [https://pdbe.org/3eer PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eer RCSB], [https://www.ebi.ac.uk/pdbsum/3eer PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eer ProSAT]</span></td></tr>
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/3eer_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eer ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Organic hydroperoxide resistance protein|Organic hydroperoxide resistance protein]]
-[[Category: Vibrio cholerae o1 biovar el tor]]
+__TOC__
-[[Category: Anderson, W F.]]
+</StructureSection>
-[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, A.]]
+[[Category: Vibch]]
-[[Category: Kwon, K.]]
+[[Category: Anderson, W F]]
-[[Category: Maltseva, N.]]
+[[Category: Structural genomic]]
-[[Category: Nocek, B.]]
+[[Category: Joachimiak, A]]
-[[Category: Center for structural genomics of infectious disease]]
+[[Category: Kwon, K]]
+[[Category: Maltseva, N]]
+[[Category: Nocek, B]]
 [[Category: Csgid]]
 [[Category: Organic hydroperoxide resistance protein]]
 [[Category: Orhc]]
 [[Category: Oxidoreductase]]
-[[Category: Structural genomic]]