3dnx: Difference between revisions

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'''Unreleased structure'''


The entry 3dnx is ON HOLD  until Aug 27 2009
==SPO1766 protein of unknown function from Silicibacter pomeroyi.==
 
<StructureSection load='3dnx' size='340' side='right'caption='[[3dnx]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
Authors: Osipiuk, J., Mulligan, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dnx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_700808 Atcc 700808]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNX FirstGlance]. <br>
Description: SPO1766 protein of unknown function from Silicibacter pomeroyi. (CASP Target)
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 23 12:15:41 2008''
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPO1766 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89184 ATCC 700808])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dnx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnx OCA], [https://pdbe.org/3dnx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dnx RCSB], [https://www.ebi.ac.uk/pdbsum/3dnx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnx ProSAT], [https://www.topsan.org/Proteins/MCSG/3dnx TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/3dnx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dnx ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Atcc 700808]]
[[Category: Large Structures]]
[[Category: Clancy, S]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Mulligan, R]]
[[Category: Osipiuk, J]]
[[Category: Apc88088]]
[[Category: Mcsg]]
[[Category: Protein of unknown function]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 11:03, 9 February 2022

SPO1766 protein of unknown function from Silicibacter pomeroyi.SPO1766 protein of unknown function from Silicibacter pomeroyi.

Structural highlights

3dnx is a 1 chain structure with sequence from Atcc 700808. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:SPO1766 (ATCC 700808)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dnx, resolution 1.94Å

Drag the structure with the mouse to rotate

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OCA