3c5o: Difference between revisions

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[[Image:3c5o.png|left|200px]]


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==Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris==
The line below this paragraph, containing "STRUCTURE_3c5o", creates the "Structure Box" on the page.
<StructureSection load='3c5o' size='340' side='right'caption='[[3c5o]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3c5o]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhopa Rhopa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5O FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-->
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3c5o|  PDB=3c5o  |  SCENE=  }}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPA1785 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5o OCA], [https://pdbe.org/3c5o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5o RCSB], [https://www.ebi.ac.uk/pdbsum/3c5o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5o ProSAT], [https://www.topsan.org/Proteins/MCSG/3c5o TOPSAN]</span></td></tr>
===Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris===
</table>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3C5O is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_cga009 Rhodopseudomonas palustris cga009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5O OCA].  
  <jmolCheckbox>
[[Category: Rhodopseudomonas palustris cga009]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c5/3c5o_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Edwards, A M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Evdokimova, E.]]
  </jmolCheckbox>
[[Category: Joachimiak, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c5o ConSurf].
[[Category: Kim, Y.]]
<div style="clear:both"></div>
[[Category: Kudritska, M.]]
__TOC__
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</StructureSection>
[[Category: Savchenko, A.]]
[[Category: Large Structures]]
[[Category: Rhopa]]
[[Category: Edwards, A M]]
[[Category: Evdokimova, E]]
[[Category: Joachimiak, A]]
[[Category: Kim, Y]]
[[Category: Kudritska, M]]
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Beta-barrel]]
[[Category: Beta-barrel]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 00:23:14 2008''

Latest revision as of 10:44, 27 January 2022

Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustrisCrystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris

Structural highlights

3c5o is a 4 chain structure with sequence from Rhopa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:RPA1785 (RHOPA)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c5o, resolution 2.20Å

Drag the structure with the mouse to rotate

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OCA
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