3c5o: Difference between revisions

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[[Image:3c5o.jpg|left|200px]]


{{Structure
==Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris==
|PDB= 3c5o |SIZE=350|CAPTION= <scene name='initialview01'>3c5o</scene>, resolution 2.20&Aring;
<StructureSection load='3c5o' size='340' side='right'caption='[[3c5o]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Gol+Binding+Site+For+Residue+D+156'>AC1</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[3c5o]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhopa Rhopa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5O FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
|GENE= RPA1785 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 Rhodopseudomonas palustris CGA009])
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPA1785 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>
|RELATEDENTRY=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5o OCA], [https://pdbe.org/3c5o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5o RCSB], [https://www.ebi.ac.uk/pdbsum/3c5o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5o ProSAT], [https://www.topsan.org/Proteins/MCSG/3c5o TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5o OCA], [http://www.ebi.ac.uk/pdbsum/3c5o PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c5o RCSB]</span>
</table>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c5/3c5o_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
3C5O is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_cga009 Rhodopseudomonas palustris cga009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5O OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Rhodopseudomonas palustris cga009]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c5o ConSurf].
[[Category: Edwards, A M.]]
<div style="clear:both"></div>
[[Category: Evdokimova, E.]]
__TOC__
[[Category: Joachimiak, A.]]
</StructureSection>
[[Category: Kim, Y.]]
[[Category: Large Structures]]
[[Category: Kudritska, M.]]
[[Category: Rhopa]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Edwards, A M]]
[[Category: Savchenko, A.]]
[[Category: Evdokimova, E]]
[[Category: beta-barrel]]
[[Category: Joachimiak, A]]
[[Category: mcsg]]
[[Category: Kim, Y]]
[[Category: midwest center for structural genomic]]
[[Category: Kudritska, M]]
[[Category: protein structure initiative]]
[[Category: Structural genomic]]
[[Category: psi-2]]
[[Category: Savchenko, A]]
[[Category: structural genomic]]
[[Category: Beta-barrel]]
[[Category: unknown function]]
[[Category: Mcsg]]
 
[[Category: PSI, Protein structure initiative]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:30:49 2008''
[[Category: Unknown function]]

Latest revision as of 10:44, 27 January 2022

Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustrisCrystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris

Structural highlights

3c5o is a 4 chain structure with sequence from Rhopa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:RPA1785 (RHOPA)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c5o, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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