3c5o: Difference between revisions

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New page: left|200px<br /><applet load="3c5o" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c5o, resolution 2.20Å" /> '''Crystal structure of...
 
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[[Image:3c5o.jpg|left|200px]]<br /><applet load="3c5o" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3c5o, resolution 2.20&Aring;" />
'''Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris'''<br />


==About this Structure==
==Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris==
3C5O is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_cga009 Rhodopseudomonas palustris cga009] with <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Site: <scene name='pdbsite=AC1:Gol+Binding+Site+For+Residue+D+156'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5O OCA].  
<StructureSection load='3c5o' size='340' side='right'caption='[[3c5o]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
[[Category: Rhodopseudomonas palustris cga009]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3c5o]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhopa Rhopa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5O FirstGlance]. <br>
[[Category: Edwards, A M.]]
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
[[Category: Evdokimova, E.]]
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Joachimiak, A.]]
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPA1785 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>
[[Category: Kim, Y.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5o OCA], [https://pdbe.org/3c5o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5o RCSB], [https://www.ebi.ac.uk/pdbsum/3c5o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5o ProSAT], [https://www.topsan.org/Proteins/MCSG/3c5o TOPSAN]</span></td></tr>
[[Category: Kudritska, M.]]
</table>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
== Evolutionary Conservation ==
[[Category: Savchenko, A.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: GOL]]
Check<jmol>
[[Category: beta-barrels]]
  <jmolCheckbox>
[[Category: mcsg]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c5/3c5o_consurf.spt"</scriptWhenChecked>
[[Category: midwest center for structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: psi-2]]
  </jmolCheckbox>
[[Category: structural genomics]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c5o ConSurf].
[[Category: unknown function]]
<div style="clear:both"></div>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:08:32 2008''
</StructureSection>
[[Category: Large Structures]]
[[Category: Rhopa]]
[[Category: Edwards, A M]]
[[Category: Evdokimova, E]]
[[Category: Joachimiak, A]]
[[Category: Kim, Y]]
[[Category: Kudritska, M]]
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Beta-barrel]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 10:44, 27 January 2022

Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustrisCrystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris

Structural highlights

3c5o is a 4 chain structure with sequence from Rhopa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:RPA1785 (RHOPA)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c5o, resolution 2.20Å

Drag the structure with the mouse to rotate

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