3c07: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3c07.png|left|200px]]


<!--
==Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)==
The line below this paragraph, containing "STRUCTURE_3c07", creates the "Structure Box" on the page.
<StructureSection load='3c07' size='340' side='right'caption='[[3c07]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3c07]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Strco Strco]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ofl 2ofl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C07 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-->
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3c07|  PDB=3c07  |  SCENE=  }}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCO4850, SC5G8.18c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=100226 STRCO])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c07 OCA], [https://pdbe.org/3c07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c07 RCSB], [https://www.ebi.ac.uk/pdbsum/3c07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c07 ProSAT], [https://www.topsan.org/Proteins/MCSG/3c07 TOPSAN]</span></td></tr>
===Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)===
</table>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3C07 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ofl 2ofl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C07 OCA].  
  <jmolCheckbox>
[[Category: Bacteria]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/3c07_consurf.spt"</scriptWhenChecked>
[[Category: Edwards, A M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Savchenko, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c07 ConSurf].
[[Category: Tan, K.]]
<div style="clear:both"></div>
[[Category: Xu, X.]]
__TOC__
[[Category: Zheng, H.]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Strco]]
[[Category: Edwards, A M]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Tan, K]]
[[Category: Xu, X]]
[[Category: Zheng, H]]
[[Category: Apc6322]]
[[Category: Apc6322]]
[[Category: Dna-binding]]
[[Category: Dna-binding]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Tetr]]
[[Category: Tetr]]
[[Category: Transcription]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
[[Category: Transcription regulator]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 23:51:25 2009''

Latest revision as of 10:38, 27 January 2022

Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)

Structural highlights

3c07 is a 2 chain structure with sequence from Strco. This structure supersedes the now removed PDB entry 2ofl. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:SCO4850, SC5G8.18c (STRCO)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c07, resolution 2.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3c07&oldid=3508136"