3c07: Difference between revisions

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[[Image:3c07.jpg|left|200px]]<br /><applet load="3c07" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3c07, resolution 2.70&Aring;" />
'''Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)'''<br />


==About this Structure==
==Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)==
3C07 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. This structure supersedes the now removed PDB entry 2OFL. Known structural/functional Sites: <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+252'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+253'>AC2</scene> and <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+B+252'>AC3</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C07 OCA].  
<StructureSection load='3c07' size='340' side='right'caption='[[3c07]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
[[Category: Bacteria]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3c07]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Strco Strco]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ofl 2ofl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C07 FirstGlance]. <br>
[[Category: Edwards, A M.]]
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Joachimiak, A.]]
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCO4850, SC5G8.18c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=100226 STRCO])</td></tr>
[[Category: Savchenko, A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c07 OCA], [https://pdbe.org/3c07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c07 RCSB], [https://www.ebi.ac.uk/pdbsum/3c07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c07 ProSAT], [https://www.topsan.org/Proteins/MCSG/3c07 TOPSAN]</span></td></tr>
[[Category: Tan, K.]]
</table>
[[Category: Xu, X.]]
== Evolutionary Conservation ==
[[Category: Zheng, H.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: SO4]]
Check<jmol>
[[Category: apc6322]]
  <jmolCheckbox>
[[Category: dna-binding]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/3c07_consurf.spt"</scriptWhenChecked>
[[Category: mcsg]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: midwest center for structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: protein structure initiative]]
  </jmolCheckbox>
[[Category: psi-2]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c07 ConSurf].
[[Category: streptomyces coelicolor a3(2)]]
<div style="clear:both"></div>
[[Category: structural genomics]]
__TOC__
[[Category: tetr]]
</StructureSection>
[[Category: transcription]]
[[Category: Large Structures]]
[[Category: transcription regulation]]
[[Category: Strco]]
[[Category: transcription regulator]]
[[Category: Edwards, A M]]
 
[[Category: Joachimiak, A]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:07:59 2008''
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Tan, K]]
[[Category: Xu, X]]
[[Category: Zheng, H]]
[[Category: Apc6322]]
[[Category: Dna-binding]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Tetr]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]

Latest revision as of 10:38, 27 January 2022

Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)Crystal structure of a TetR family transcriptional regulator from Streptomyces coelicolor A3(2)

Structural highlights

3c07 is a 2 chain structure with sequence from Strco. This structure supersedes the now removed PDB entry 2ofl. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:SCO4850, SC5G8.18c (STRCO)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c07, resolution 2.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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