2ics: Difference between revisions

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[[Image:2ics.gif|left|200px]]


{{Structure
==Crystal structure of an adenine deaminase==
|PDB= 2ics |SIZE=350|CAPTION= <scene name='initialview01'>2ics</scene>, resolution 2.30&Aring;
<StructureSection load='2ics' size='340' side='right'caption='[[2ics]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=LCX:CARBOXYLATED+LYSINE'>LCX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ICS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ICS FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenine_deaminase Adenine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.2 3.5.4.2] </span>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ics FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ics OCA], [https://pdbe.org/2ics PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ics RCSB], [https://www.ebi.ac.uk/pdbsum/2ics PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ics ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ics TOPSAN]</span></td></tr>
|GENE=
</table>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01307 Met_dep_hydrolase_B], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01302 Cyclic_amidohydrolases]</span>
== Evolutionary Conservation ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ics FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ics OCA], [http://www.ebi.ac.uk/pdbsum/2ics PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2ics RCSB]</span>
[[Image:Consurf_key_small.gif|200px|right]]
}}
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/2ics_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ics ConSurf].
<div style="clear:both"></div>


'''Crystal structure of an adenine deaminase'''
==See Also==
 
*[[Deaminase 3D structures|Deaminase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2ICS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ICS OCA].
[[Category: Large Structures]]
[[Category: Adenine deaminase]]
[[Category: Burley SK]]
[[Category: Enterococcus faecalis]]
[[Category: Kumaran D]]
[[Category: Single protein]]
[[Category: Sugadev R]]
[[Category: Burley, S K.]]
[[Category: Swaminathan S]]
[[Category: Kumaran, D.]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Sugadev, R.]]
[[Category: Swaminathan, S.]]
[[Category: 9295a]]
[[Category: adenine complex]]
[[Category: adenine deaminase]]
[[Category: amidohydrolase]]
[[Category: binuclear zinc]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomic]]
[[Category: tim barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:31:40 2008''

Latest revision as of 13:26, 12 January 2022

Crystal structure of an adenine deaminaseCrystal structure of an adenine deaminase

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

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