2ia2: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2ia2.png|left|200px]]
-<!--
+==The crystal structure of a putative transcriptional regulator RHA06195 from Rhodococcus sp. RHA1==
-The line below this paragraph, containing "STRUCTURE_2ia2", creates the "Structure Box" on the page.
+<StructureSection load='2ia2' size='340' side='right'caption='[[2ia2]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2ia2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhojr Rhojr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IA2 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ia2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ia2 OCA], [https://pdbe.org/2ia2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ia2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ia2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ia2 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ia2 TOPSAN]</span></td></tr>
-{{STRUCTURE_2ia2|  PDB=2ia2  |  SCENE=  }}
+</table>
+== Evolutionary Conservation ==
-===The crystal structure of a putative transcriptional regulator RHA06195 from Rhodococcus sp. RHA1===
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
-==About this Structure==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/2ia2_consurf.spt"</scriptWhenChecked>
-[[2ia2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IA2 OCA].
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Rhodococcus sp.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Chruszcz, M.]]
+  </jmolCheckbox>
-[[Category: Cymborowski, M T.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ia2 ConSurf].
-[[Category: Edwards, A.]]
+<div style="clear:both"></div>
-[[Category: Joachimiak, A.]]
+__TOC__
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+</StructureSection>
-[[Category: Minor, W.]]
+[[Category: Large Structures]]
-[[Category: Onopriyenko, O.]]
+[[Category: Rhojr]]
-[[Category: Savchenko, A.]]
+[[Category: Chruszcz, M]]
-[[Category: Skarina, T.]]
+[[Category: Cymborowski, M T]]
+[[Category: Edwards, A]]
+[[Category: Joachimiak, A]]
+[[Category: Structural genomic]]
+[[Category: Minor, W]]
+[[Category: Onopriyenko, O]]
+[[Category: Savchenko, A]]
+[[Category: Skarina, T]]
 [[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
 [[Category: Sad]]
-[[Category: Structural genomic]]
 [[Category: Transcription]]
 [[Category: Transcriptional regulator]]