2h5u: Difference between revisions

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OCA

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 ==Crystal structure of laccase from Cerrena maxima at 1.9A resolution==
-<StructureSection load='2h5u' size='340' side='right' caption='[[2h5u]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='2h5u' size='340' side='right'caption='[[2h5u]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2h5u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Trametes_maxima Trametes maxima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H5U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2H5U FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2h5u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trametes_maxima Trametes maxima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H5U FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene><br>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
-<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NIY:META-NITRO-TYROSINE'>NIY</scene></td></tr>
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NIY:META-NITRO-TYROSINE'>NIY</scene></td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kya|1kya]]</td></tr>
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1kya|1kya]]</div></td></tr>
-<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Laccase Laccase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2h5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h5u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2h5u RCSB], [http://www.ebi.ac.uk/pdbsum/2h5u PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h5u OCA], [https://pdbe.org/2h5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h5u RCSB], [https://www.ebi.ac.uk/pdbsum/2h5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h5u ProSAT]</span></td></tr>
-<table>
+</table>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/2h5u_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/2h5u_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2h5u ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 27: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 2h5u" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Laccase 3D structures|Laccase 3D structures]]
 == References ==
 <references/>
@@ Line 32: / Line 37: @@
 </StructureSection>
 [[Category: Laccase]]
+[[Category: Large Structures]]
 [[Category: Trametes maxima]]
-[[Category: Bento, I.]]
+[[Category: Bento, I]]
-[[Category: Betzel, C.]]
+[[Category: Betzel, C]]
-[[Category: Gabdoulkhakov, A G.]]
+[[Category: Gabdoulkhakov, A G]]
-[[Category: Lamzin, V S.]]
+[[Category: Lamzin, V S]]
-[[Category: Lindley, P F.]]
+[[Category: Lindley, P F]]
-[[Category: Lyashenko, A V.]]
+[[Category: Lyashenko, A V]]
-[[Category: Mikhailov, A M.]]
+[[Category: Mikhailov, A M]]
-[[Category: Zaitsev, V N.]]
+[[Category: Zaitsev, V N]]
-[[Category: Zhukhlistova, N E.]]
+[[Category: Zhukhlistova, N E]]
-[[Category: Zhukova, Y N.]]
+[[Category: Zhukova, Y N]]
 [[Category: Blue multi-copper enzyme]]
 [[Category: Crystal]]