2fre: Difference between revisions

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{{Seed}}
[[Image:2fre.png|left|200px]]


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==The crystal structure of the oxidoreductase containing FMN==
The line below this paragraph, containing "STRUCTURE_2fre", creates the "Structure Box" on the page.
<StructureSection load='2fre' size='340' side='right'caption='[[2fre]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2fre]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FRE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FRE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-->
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2fre|  PDB=2fre  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fre FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fre OCA], [https://pdbe.org/2fre PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fre RCSB], [https://www.ebi.ac.uk/pdbsum/2fre PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fre ProSAT], [https://www.topsan.org/Proteins/MCSG/2fre TOPSAN]</span></td></tr>
 
</table>
===The crystal structure of the oxidoreductase containing FMN===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2FRE is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FRE OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fr/2fre_consurf.spt"</scriptWhenChecked>
[[Category: Agrobacterium tumefaciens]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Edwards, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fre ConSurf].
[[Category: Savchenko, A.]]
<div style="clear:both"></div>
[[Category: Xu, X.]]
__TOC__
[[Category: Zhang, R.]]
</StructureSection>
[[Category: Zheng, H.]]
[[Category: Agrfc]]
[[Category: Large Structures]]
[[Category: Edwards, A]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Xu, X]]
[[Category: Zhang, R]]
[[Category: Zheng, H]]
[[Category: Fmn]]
[[Category: Fmn]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
[[Category: Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:13:37 2008''

Latest revision as of 17:36, 29 December 2021

The crystal structure of the oxidoreductase containing FMNThe crystal structure of the oxidoreductase containing FMN

Structural highlights

2fre is a 2 chain structure with sequence from Agrfc. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2fre, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA