2e2t: Difference between revisions

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-[[Image:2e2t.jpg|left|200px]]
- {{Structure
+==Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with phenylhydrazine==
-|PDB= 2e2t |SIZE=350|CAPTION= <scene name='initialview01'>2e2t</scene>, resolution 2.05&Aring;
+<StructureSection load='2e2t' size='340' side='right'caption='[[2e2t]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=OTY:2-AMINO-3-(4-HYDROXY-6-OXOCYCLOHEXA-1,4-DIENYL)PROPANOIC+ACID'>OTY</scene>, <scene name='pdbligand=PHZ:1-PHENYLHYDRAZINE'>PHZ</scene>
+<table><tr><td colspan='2'>[[2e2t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E2T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E2T FirstGlance]. <br>
-|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Amine_oxidase_(copper-containing) Amine oxidase (copper-containing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.6 1.4.3.6] </span>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-|GENE=
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=YPZ:3-[(3Z)-4-HYDROXY-6-OXO-3-(2-PHENYLHYDRAZINYLIDENE)CYCLOHEXA-1,4-DIEN-1-YL]-L-ALANINE'>YPZ</scene></td></tr>
-|DOMAIN=
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1iu7|1iu7]], [[2e2u|2e2u]], [[2e2v|2e2v]]</div></td></tr>
-|RELATEDENTRY=[[1iu7|1IU7]]
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Oxidoreductase Oxidoreductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 and 1.4.3.22 1.4.3.21 and 1.4.3.22] </span></td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e2t OCA], [http://www.ebi.ac.uk/pdbsum/2e2t PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2e2t RCSB]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e2t OCA], [https://pdbe.org/2e2t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e2t RCSB], [https://www.ebi.ac.uk/pdbsum/2e2t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e2t ProSAT]</span></td></tr>
-}}
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e2/2e2t_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e2t ConSurf].
+<div style="clear:both"></div>
-'''Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with phenylhydrazine'''
+==See Also==
+*[[Copper amine oxidase 3D structures|Copper amine oxidase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-E2T is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E2T OCA].
+[[Category: Large Structures]]
-[[Category: Amine oxidase (copper-containing)]]
+[[Category: Oxidoreductase]]
-[[Category: Arthrobacter globiformis]]
+[[Category: Hayashi, H]]
-[[Category: Single protein]]
+[[Category: Kuroda, S]]
-[[Category: Hayashi, H.]]
+[[Category: Murakawa, T]]
-[[Category: Kuroda, S.]]
+[[Category: Okajima, T]]
-[[Category: Murakawa, T.]]
+[[Category: Taki, M]]
-[[Category: Okajima, T.]]
+[[Category: Tanizawa, K]]
-[[Category: Taki, M.]]
+[[Category: Yamamoto, Y]]
-[[Category: Tanizawa, K.]]
+[[Category: Amine oxidase]]
-[[Category: Yamamoto, Y.]]
+[[Category: Phenylhydrazine]]
-[[Category: amine oxidase]]
+[[Category: Substrate schiff-base]]
-[[Category: copper]]
+[[Category: Topaquinone]]
-[[Category: oxidoreductase]]
+[[Category: Tpq]]
-[[Category: phenylhydrazine]]
-[[Category: substrate schiff-base]]
-[[Category: topaquinone]]
-[[Category: tpq]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:42:52 2008''