1k11: Difference between revisions
New page: '''Theoretical Model''' The entry 1K11 is a Theoretical Model titled 'Theoretical Structure of Icap1-alpha Bound to Integrin beta1 Cytoplasmic Domain'. Category:Theoretical Model '... |
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{{Theoretical_model}} | |||
The | ==THEORETICAL STRUCTURE OF ICAP1-ALPHA BOUND TO INTEGRIN BETA1 CYTOPLASMIC DOMAIN== | ||
<StructureSection load='1k11' size='340' side='right'caption='[[1k11]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K11 FirstGlance]. <br> | |||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k11 FirstGlance], [https://www.ebi.ac.uk/pdbsum/1k11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k11 ProSAT]</span></td></tr> | |||
</table> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Icap1 alpha is a 200-amino acid protein that binds to the COOH-terminal 13 amino acids ((786)AVTTVVNPKYEGK(798)) of the integrin beta(1) subunit. Alanine scanning mutagenesis of this region revealed that Val(787), Val(790), and (792)NPKY(795) are critical for Icap1 alpha binding. The NPXY motif is a known binding substrate for phosphotyrosine binding (PTB) domain proteins. The sequences of Icap1 alpha, residues 58--200, and the beta(1) integrin, residues 786-797, were aligned to the available PTB-peptide structures to generate a high quality structural model. Site-directed mutagenesis showed that Leu(135), Ile(138), and Ile(139) of Icap1 alpha, residues predicted by the model to be in close proximity to (792)NPKY(795), and Leu(82) and Tyr(144), residues expected to form a hydrophobic pocket near Val(787), are required for the Icap1 alpha-beta(1) integrin interaction. These findings indicate that Icap1 alpha is a PTB domain protein, which recognizes the NPXY motif of beta(1) integrin. Furthermore, our date suggest that an interaction between Val(787) and the hydrophobic pocket created by Leu(82) and Tyr(144) of Icap1 alpha forms the basis for the specificity of Icap1 alpha for the beta(1) integrin subunit. | |||
Molecular basis for interaction between Icap1 alpha PTB domain and beta 1 integrin.,Chang DD, Hoang BQ, Liu J, Springer TA J Biol Chem. 2002 Mar 8;277(10):8140-5. Epub 2001 Dec 7. PMID:11741908<ref>PMID:11741908</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
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<div class="pdbe-citations 1k11" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Theoretical Model]] | |||
[[Category: Large Structures]] | |||
[[Category: Chang, D D]] | |||
[[Category: Hoang, B Q]] | |||
[[Category: Liu, J]] | |||
[[Category: Springer, T A]] | |||