2qzu: Difference between revisions

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[[Image:2qzu.jpg|left|200px]]


{{Structure
==Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123==
|PDB= 2qzu |SIZE=350|CAPTION= <scene name='initialview01'>2qzu</scene>, resolution 1.70&Aring;
<StructureSection load='2qzu' size='340' side='right'caption='[[2qzu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2qzu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacfr Bacfr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QZU FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|GENE= BF0881 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 Bacteroides fragilis YCH46])
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1auk|1auk]], [[1hdh|1hdh]]</div></td></tr>
}}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF0881 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 BACFR])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qzu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qzu OCA], [https://pdbe.org/2qzu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qzu RCSB], [https://www.ebi.ac.uk/pdbsum/2qzu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qzu ProSAT], [https://www.topsan.org/Proteins/NESGC/2qzu TOPSAN]</span></td></tr>
'''Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123'''
</table>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2QZU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_ych46 Bacteroides fragilis ych46]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA].  
  <jmolCheckbox>
[[Category: Bacteroides fragilis ych46]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qz/2qzu_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Abashidze, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Acton, T B.]]
  </jmolCheckbox>
[[Category: Cunningham, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qzu ConSurf].
[[Category: Hunt, J F.]]
<div style="clear:both"></div>
[[Category: Maglaqui, M.]]
__TOC__
[[Category: Montelione, G T.]]
</StructureSection>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Bacfr]]
[[Category: Owens, L.]]
[[Category: Large Structures]]
[[Category: Seetharaman, J.]]
[[Category: Abashidze, M]]
[[Category: Tong, L.]]
[[Category: Acton, T B]]
[[Category: Vorobiev, S M.]]
[[Category: Cunningham, K]]
[[Category: Wang, D.]]
[[Category: Hunt, J F]]
[[Category: Xiao, R.]]
[[Category: Maglaqui, M]]
[[Category: arylsulfatase]]
[[Category: Montelione, G T]]
[[Category: bfr123]]
[[Category: Structural genomic]]
[[Category: hydrolase]]
[[Category: Owens, L]]
[[Category: nesg]]
[[Category: Seetharaman, J]]
[[Category: northeast structural genomics consortium]]
[[Category: Tong, L]]
[[Category: protein structure initiative]]
[[Category: Vorobiev, S M]]
[[Category: psi-2]]
[[Category: Wang, D]]
[[Category: q64xz4_bacfr]]
[[Category: Xiao, R]]
[[Category: structural genomic]]
[[Category: Arylsulfatase]]
[[Category: sulfatase]]
[[Category: Bfr123]]
[[Category: yidj]]
[[Category: Hydrolase]]
 
[[Category: Nesg]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:31:13 2008''
[[Category: PSI, Protein structure initiative]]
[[Category: Q64xz4_bacfr]]
[[Category: Sulfatase]]
[[Category: Yidj]]

Latest revision as of 07:10, 2 July 2021

Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123

Structural highlights

2qzu is a 1 chain structure with sequence from Bacfr. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:BF0881 (BACFR)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2qzu, resolution 1.70Å

Drag the structure with the mouse to rotate

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OCA
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