2qzu: Difference between revisions

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-[[Image:2qzu.png|left|200px]]
-{{STRUCTURE_2qzu|  PDB=2qzu  |  SCENE=  }}
+==Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123==
+<StructureSection load='2qzu' size='340' side='right'caption='[[2qzu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-===Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2qzu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacfr Bacfr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QZU FirstGlance]. <br>
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-==About this Structure==
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1auk|1auk]], [[1hdh|1hdh]]</div></td></tr>
-[[2qzu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA].
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF0881 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 BACFR])</td></tr>
-[[Category: Bacteroides fragilis]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qzu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qzu OCA], [https://pdbe.org/2qzu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qzu RCSB], [https://www.ebi.ac.uk/pdbsum/2qzu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qzu ProSAT], [https://www.topsan.org/Proteins/NESGC/2qzu TOPSAN]</span></td></tr>
-[[Category: Abashidze, M.]]
+</table>
-[[Category: Acton, T B.]]
+== Evolutionary Conservation ==
-[[Category: Cunningham, K.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Hunt, J F.]]
+Check<jmol>
-[[Category: Maglaqui, M.]]
+  <jmolCheckbox>
-[[Category: Montelione, G T.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qz/2qzu_consurf.spt"</scriptWhenChecked>
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Owens, L.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Seetharaman, J.]]
+  </jmolCheckbox>
-[[Category: Tong, L.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qzu ConSurf].
-[[Category: Vorobiev, S M.]]
+<div style="clear:both"></div>
-[[Category: Wang, D.]]
+__TOC__
-[[Category: Xiao, R.]]
+</StructureSection>
+[[Category: Bacfr]]
+[[Category: Large Structures]]
+[[Category: Abashidze, M]]
+[[Category: Acton, T B]]
+[[Category: Cunningham, K]]
+[[Category: Hunt, J F]]
+[[Category: Maglaqui, M]]
+[[Category: Montelione, G T]]
+[[Category: Structural genomic]]
+[[Category: Owens, L]]
+[[Category: Seetharaman, J]]
+[[Category: Tong, L]]
+[[Category: Vorobiev, S M]]
+[[Category: Wang, D]]
+[[Category: Xiao, R]]
 [[Category: Arylsulfatase]]
 [[Category: Bfr123]]
 [[Category: Hydrolase]]
 [[Category: Nesg]]
-[[Category: Northeast structural genomics consortium]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
 [[Category: Q64xz4_bacfr]]
-[[Category: Structural genomic]]
 [[Category: Sulfatase]]
 [[Category: Yidj]]