2qsd: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2qsd.jpg|left|200px]]<br /><applet load="2qsd" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2qsd, resolution 2.50&Aring;" />
-'''Crystal structure of a protein Il1583 from Idiomarina loihiensis'''<br />
-==About this Structure==
+==Crystal structure of a protein Il1583 from Idiomarina loihiensis==
-QSD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Idiomarina_loihiensis Idiomarina loihiensis] with <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSD OCA].
+<StructureSection load='2qsd' size='340' side='right'caption='[[2qsd]]' scene=''>
-[[Category: Idiomarina loihiensis]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QSD FirstGlance]. <br>
-[[Category: Bain, K.]]
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qsd OCA], [https://pdbe.org/2qsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qsd RCSB], [https://www.ebi.ac.uk/pdbsum/2qsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qsd ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qsd TOPSAN]</span></td></tr>
-[[Category: Bonanno, J.]]
+</table>
-[[Category: Burley, S K.]]
+== Evolutionary Conservation ==
-[[Category: Gheyi, T.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Koss, J.]]
+Check<jmol>
-[[Category: Mckenzie, C.]]
+  <jmolCheckbox>
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qs/2qsd_consurf.spt"</scriptWhenChecked>
-[[Category: Patskovsky, Y.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Romero, R.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Rutter, M.]]
+  </jmolCheckbox>
-[[Category: Sauder, J M.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qsd ConSurf].
-[[Category: Wasserman, S R.]]
+<div style="clear:both"></div>
-[[Category: GOL]]
+__TOC__
-[[Category: new york structural genomics research consortium]]
+</StructureSection>
-[[Category: new york structural genomix research consortium]]
+[[Category: Large Structures]]
-[[Category: nysgrc]]
+[[Category: Almo SC]]
-[[Category: nysgxrc]]
+[[Category: Bain K]]
-[[Category: protein structure initiative]]
+[[Category: Bonanno J]]
-[[Category: psi-2]]
+[[Category: Burley SK]]
-[[Category: structural genomics]]
+[[Category: Gheyi T]]
-[[Category: unknown function]]
+[[Category: Koss J]]
+[[Category: Mckenzie C]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:41:49 2008''
+[[Category: Patskovsky Y]]
+[[Category: Romero R]]
+[[Category: Rutter M]]
+[[Category: Sauder JM]]
+[[Category: Wasserman SR]]