2qqy: Difference between revisions

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-{{Seed}}
-[[Image:2qqy.png|left|200px]]
-<!--
+==Crystal structure of ferritin like, diiron-carboxylate proteins from Bacillus anthracis str. Ames==
-The line below this paragraph, containing "STRUCTURE_2qqy", creates the "Structure Box" on the page.
+<StructureSection load='2qqy' size='340' side='right'caption='[[2qqy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2qqy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_(strain_ames) Bacillus anthracis (strain ames)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QQY FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
--->
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAS0929, BA_0993, GBAA0993 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198094 Bacillus anthracis (strain Ames)])</td></tr>
-{{STRUCTURE_2qqy|  PDB=2qqy  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qqy OCA], [https://pdbe.org/2qqy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qqy RCSB], [https://www.ebi.ac.uk/pdbsum/2qqy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qqy ProSAT], [https://www.topsan.org/Proteins/MCSG/2qqy TOPSAN]</span></td></tr>
+</table>
-===Crystal structure of ferritin like, diiron-carboxylate proteins from Bacillus anthracis str. Ames===
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-==About this Structure==
+  <jmolCheckbox>
-QQY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_str._ames Bacillus anthracis str. ames]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQY OCA].
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qq/2qqy_consurf.spt"</scriptWhenChecked>
-[[Category: Bacillus anthracis str. ames]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Gornicki, P.]]
+  </jmolCheckbox>
-[[Category: Joachimiak, A.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qqy ConSurf].
-[[Category: Joachimiak, G.]]
+<div style="clear:both"></div>
-[[Category: Kim, Y.]]
+__TOC__
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+</StructureSection>
-[[Category: Patterson, S.]]
+[[Category: Large Structures]]
-[[Category: Wu, R.]]
+[[Category: Gornicki, P]]
+[[Category: Joachimiak, A]]
+[[Category: Joachimiak, G]]
+[[Category: Kim, Y]]
+[[Category: Structural genomic]]
+[[Category: Patterson, S]]
+[[Category: Wu, R]]
 [[Category: Dodecameric alpha-helical]]
 [[Category: Ferritin fold]]
 [[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
 [[Category: Unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 18:23:58 2008''