2qqy: Difference between revisions

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-[[Image:2qqy.gif|left|200px]]
- {{Structure
+==Crystal structure of ferritin like, diiron-carboxylate proteins from Bacillus anthracis str. Ames==
-|PDB= 2qqy |SIZE=350|CAPTION= <scene name='initialview01'>2qqy</scene>, resolution 2.00&Aring;
+<StructureSection load='2qqy' size='340' side='right'caption='[[2qqy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+<table><tr><td colspan='2'>[[2qqy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_(strain_ames) Bacillus anthracis (strain ames)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QQY FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|GENE= BAS0929, BA_0993, GBAA0993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198094 Bacillus anthracis str. Ames])
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAS0929, BA_0993, GBAA0993 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198094 Bacillus anthracis (strain Ames)])</td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00657 Ferritin_like]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qqy OCA], [https://pdbe.org/2qqy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qqy RCSB], [https://www.ebi.ac.uk/pdbsum/2qqy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qqy ProSAT], [https://www.topsan.org/Proteins/MCSG/2qqy TOPSAN]</span></td></tr>
-|RELATEDENTRY=
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qqy OCA], [http://www.ebi.ac.uk/pdbsum/2qqy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qqy RCSB]</span>
+== Evolutionary Conservation ==
-}}
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-'''Crystal structure of ferritin like, diiron-carboxylate proteins from Bacillus anthracis str. Ames'''
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qq/2qqy_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-==About this Structure==
+    <text>to colour the structure by Evolutionary Conservation</text>
-QQY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_str._ames Bacillus anthracis str. ames]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQY OCA].
+  </jmolCheckbox>
-[[Category: Bacillus anthracis str. ames]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qqy ConSurf].
-[[Category: Single protein]]
+<div style="clear:both"></div>
-[[Category: Gornicki, P.]]
+__TOC__
-[[Category: Joachimiak, A.]]
+</StructureSection>
-[[Category: Joachimiak, G.]]
+[[Category: Large Structures]]
-[[Category: Kim, Y.]]
+[[Category: Gornicki, P]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Joachimiak, A]]
-[[Category: Patterson, S.]]
+[[Category: Joachimiak, G]]
-[[Category: Wu, R.]]
+[[Category: Kim, Y]]
-[[Category: dodecameric alpha-helical]]
+[[Category: Structural genomic]]
-[[Category: ferritin fold]]
+[[Category: Patterson, S]]
-[[Category: mcsg]]
+[[Category: Wu, R]]
-[[Category: midwest center for structural genomic]]
+[[Category: Dodecameric alpha-helical]]
-[[Category: protein structure initiative]]
+[[Category: Ferritin fold]]
-[[Category: psi-2]]
+[[Category: Mcsg]]
-[[Category: structural genomic]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: unknown function]]
+[[Category: Unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:52:15 2008''