2p7n: Difference between revisions

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-[[Image:2p7n.jpg|left|200px]]
- {{Structure
+==Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.==
-|PDB= 2p7n |SIZE=350|CAPTION= <scene name='initialview01'>2p7n</scene>, resolution 2.800&Aring;
+<StructureSection load='2p7n' size='340' side='right'caption='[[2p7n]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+<table><tr><td colspan='2'>[[2p7n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P7N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P7N FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|GENE= sipD, CV_2617 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536 Chromobacterium violaceum])
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2jaa|2jaa]]</div></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06511 IpaD]</span>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sipD, CV_2617 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536 "Chromobacterium janthinum" (Zopf) Ford 1927])</td></tr>
-|RELATEDENTRY=[[2jaa|2JAA]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p7n OCA], [https://pdbe.org/2p7n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p7n RCSB], [https://www.ebi.ac.uk/pdbsum/2p7n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p7n ProSAT], [https://www.topsan.org/Proteins/NESGC/2p7n TOPSAN]</span></td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p7n OCA], [http://www.ebi.ac.uk/pdbsum/2p7n PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2p7n RCSB]</span>
+</table>
-}}
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-'''Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.'''
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p7/2p7n_consurf.spt"</scriptWhenChecked>
-==About this Structure==
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-P7N is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P7N OCA].
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Chromobacterium violaceum]]
+  </jmolCheckbox>
-[[Category: Single protein]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p7n ConSurf].
-[[Category: Abashidze, M.]]
+<div style="clear:both"></div>
-[[Category: Acton, T B.]]
+__TOC__
-[[Category: Baran, M C.]]
+</StructureSection>
-[[Category: Benach, J.]]
+[[Category: Large Structures]]
-[[Category: Cunningham, K.]]
+[[Category: Abashidze, M]]
-[[Category: Hunt, J F.]]
+[[Category: Acton, T B]]
-[[Category: Janjua, H.]]
+[[Category: Baran, M C]]
-[[Category: Liu, J.]]
+[[Category: Benach, J]]
-[[Category: Ma, L C.]]
+[[Category: Cunningham, K]]
-[[Category: Montelione, G T.]]
+[[Category: Hunt, J F]]
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+[[Category: Janjua, H]]
-[[Category: Rost, B.]]
+[[Category: Liu, J]]
-[[Category: Seetharaman, J.]]
+[[Category: Ma, L C]]
-[[Category: Tong, L.]]
+[[Category: Montelione, G T]]
-[[Category: Xiao, R.]]
+[[Category: Structural genomic]]
-[[Category: Zhao, L.]]
+[[Category: Rost, B]]
-[[Category: cvr69]]
+[[Category: Seetharaman, J]]
-[[Category: nesg]]
+[[Category: Tong, L]]
-[[Category: northeast structural genomics consortium]]
+[[Category: Xiao, R]]
-[[Category: pathogenicity island 1 effector protein]]
+[[Category: Zhao, L]]
-[[Category: protein structure initiative]]
+[[Category: Cell invasion]]
-[[Category: psi-2]]
+[[Category: Cvr69]]
-[[Category: structural genomic]]
+[[Category: Nesg]]
+[[Category: Pathogenicity island 1 effector protein]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:31:36 2008''
+[[Category: PSI, Protein structure initiative]]