2iee: Difference between revisions

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[[Image:2iee.gif|left|200px]]


{{Structure
==Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.==
|PDB= 2iee |SIZE=350|CAPTION= <scene name='initialview01'>2iee</scene>, resolution 2.20&Aring;
<StructureSection load='2iee' size='340' side='right'caption='[[2iee]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2iee]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IEE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IEE FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|GENE= yckB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yckB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00134 PBPb]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iee OCA], [https://pdbe.org/2iee PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iee RCSB], [https://www.ebi.ac.uk/pdbsum/2iee PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iee ProSAT], [https://www.topsan.org/Proteins/NESGC/2iee TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2iee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iee OCA], [http://www.ebi.ac.uk/pdbsum/2iee PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2iee RCSB]</span>
== Function ==
}}
[[https://www.uniprot.org/uniprot/YCKB_BACSU YCKB_BACSU]] Probably part of a binding-protein-dependent transport system.  
 
== Evolutionary Conservation ==
'''Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ie/2iee_consurf.spt"</scriptWhenChecked>
2IEE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IEE OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bacillus subtilis]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Acton, T B.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iee ConSurf].
[[Category: Baran, M C.]]
<div style="clear:both"></div>
[[Category: Chen, X C.]]
__TOC__
[[Category: Cunningham, K.]]
</StructureSection>
[[Category: Hunt, J F.]]
[[Category: Bacillus globigii migula 1900]]
[[Category: Jang, M.]]
[[Category: Large Structures]]
[[Category: Jayaraman, S.]]
[[Category: Acton, T B]]
[[Category: Kuzin, A P.]]
[[Category: Baran, M C]]
[[Category: Liu, J.]]
[[Category: Chen, X C]]
[[Category: Ma, C.]]
[[Category: Cunningham, K]]
[[Category: Montelione, G T.]]
[[Category: Hunt, J F]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Jang, M]]
[[Category: Rost, B.]]
[[Category: Jayaraman, S]]
[[Category: Su, M.]]
[[Category: Kuzin, A P]]
[[Category: Tong, L.]]
[[Category: Liu, J]]
[[Category: Xiao, R.]]
[[Category: Ma, C]]
[[Category: nesg]]
[[Category: Montelione, G T]]
[[Category: northeast structural genomics consortium]]
[[Category: Structural genomic]]
[[Category: protein structure initiative]]
[[Category: Rost, B]]
[[Category: psi-2]]
[[Category: Su, M]]
[[Category: sr574]]
[[Category: Tong, L]]
[[Category: structural genomic]]
[[Category: Xiao, R]]
[[Category: x-ray]]
[[Category: Nesg]]
[[Category: yckb]]
[[Category: PSI, Protein structure initiative]]
 
[[Category: Sr574]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:43:11 2008''
[[Category: Unknown function]]
[[Category: Yckb]]

Latest revision as of 14:14, 31 March 2021

Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.

Structural highlights

2iee is a 2 chain structure with sequence from "bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:yckB ("Bacillus globigii" Migula 1900)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[YCKB_BACSU] Probably part of a binding-protein-dependent transport system.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2iee, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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