2guh: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2guh.gif|left|200px]]<br /><applet load="2guh" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2guh, resolution 1.52&Aring;" />
-'''Crystal Structure of the Putative TetR-family Transcriptional Regulator from Rhodococcus sp. RHA1'''<br />
-==About this Structure==
+==Crystal Structure of the Putative TetR-family Transcriptional Regulator from Rhodococcus sp. RHA1==
-GUH is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUH OCA].
+<StructureSection load='2guh' size='340' side='right'caption='[[2guh]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
-[[Category: Protein complex]]
+== Structural highlights ==
-[[Category: Rhodococcus sp.]]
+<table><tr><td colspan='2'>[[2guh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhojr Rhojr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GUH FirstGlance]. <br>
-[[Category: Edwards, A.]]
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-[[Category: Joachimiak, A.]]
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: Kim, Y.]]
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rha6424 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=101510 RHOJR])</td></tr>
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2guh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2guh OCA], [https://pdbe.org/2guh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2guh RCSB], [https://www.ebi.ac.uk/pdbsum/2guh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2guh ProSAT], [https://www.topsan.org/Proteins/MCSG/2guh TOPSAN]</span></td></tr>
-[[Category: Savchenko, A.]]
+</table>
-[[Category: Skarina, T.]]
+== Evolutionary Conservation ==
-[[Category: Zheng, H.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: EDO]]
+Check<jmol>
-[[Category: MG]]
+  <jmolCheckbox>
-[[Category: helix-turn-helix]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2guh_consurf.spt"</scriptWhenChecked>
-[[Category: mcsg]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: midwest center for structural genomics]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: protein structure initiative]]
+  </jmolCheckbox>
-[[Category: psi]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2guh ConSurf].
-[[Category: structural genomics]]
+<div style="clear:both"></div>
-[[Category: tetr fold]]
+__TOC__
+</StructureSection>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:08:27 2008''
+[[Category: Large Structures]]
+[[Category: Rhojr]]
+[[Category: Edwards, A]]
+[[Category: Joachimiak, A]]
+[[Category: Kim, Y]]
+[[Category: Structural genomic]]
+[[Category: Savchenko, A]]
+[[Category: Skarina, T]]
+[[Category: Zheng, H]]
+[[Category: Helix-turn-helix]]
+[[Category: Mcsg]]
+[[Category: PSI, Protein structure initiative]]
+[[Category: Tetr fold]]
+[[Category: Transcription]]