2gbo: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2gbo.png|left|200px]]


<!--
==Protein of Unknown Function EF2458 from Enterococcus faecalis==
The line below this paragraph, containing "STRUCTURE_2gbo", creates the "Structure Box" on the page.
<StructureSection load='2gbo' size='340' side='right'caption='[[2gbo]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2gbo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Entfa Entfa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GBO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GBO FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-->
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EF_2458 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226185 ENTFA])</td></tr>
{{STRUCTURE_2gbo|  PDB=2gbo  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gbo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gbo OCA], [https://pdbe.org/2gbo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gbo RCSB], [https://www.ebi.ac.uk/pdbsum/2gbo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gbo ProSAT], [https://www.topsan.org/Proteins/MCSG/2gbo TOPSAN]</span></td></tr>
 
</table>
===Protein of Unknown Function EF2458 from Enterococcus faecalis===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2GBO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GBO OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/2gbo_consurf.spt"</scriptWhenChecked>
[[Category: Enterococcus faecalis]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Bargassa, M.]]
  </jmolCheckbox>
[[Category: Joachimiak, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gbo ConSurf].
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: Osipiuk, J.]]
__TOC__
[[Category: Wu, R.]]
</StructureSection>
[[Category: Entfa]]
[[Category: Large Structures]]
[[Category: Bargassa, M]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Osipiuk, J]]
[[Category: Wu, R]]
[[Category: Hypothetical protein]]
[[Category: Hypothetical protein]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Unknown function]]
[[Category: Psi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 20:39:02 2008''

Latest revision as of 21:55, 10 March 2021

Protein of Unknown Function EF2458 from Enterococcus faecalisProtein of Unknown Function EF2458 from Enterococcus faecalis

Structural highlights

2gbo is a 2 chain structure with sequence from Entfa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:EF_2458 (ENTFA)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gbo, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2gbo&oldid=3367363"