|
|
(7 intermediate revisions by 3 users not shown) |
Line 1: |
Line 1: |
| <StructureSection load='3drg' size='350' side='right' caption='Oligopeptide-binding protein (grey) complex with peptide bradykinin (cyan) and Cl- ion (green) (PDB entry [[3drg]])' scene='48/488461/Cv/1'> | | <StructureSection load='' size='350' side='right' caption='Oligopeptide-binding protein (grey) complex with peptide bradykinin (cyan) and Cl- ion (green) (PDB entry [[3drg]])' scene='48/488461/Cv/1'> |
| == Function == | | == Function == |
| '''Oligopeptide-binding protein''' (Opp) is a component of the | | '''Oligopeptide-binding protein''' (Opp) is a component of the |
Line 5: |
Line 5: |
|
| |
|
| == Structural highlights == | | == Structural highlights == |
| The bradykinin peptide is nestled between the 2 domains of Opp<ref>PMID:19300437</ref>. <scene name='48/488461/Cv/3'>Bradykinin peptide binding site</scene>. | | The bradykinin peptide is nestled between the 2 domains of Opp<ref>PMID:19300437</ref>. <scene name='48/488461/Cv/6'>Bradykinin peptide binding site</scene>. |
| | *<scene name='48/488461/Cv/7'>Cl coordination site</scene>. Water molecule is shown as red sphere. |
| </StructureSection> | | </StructureSection> |
|
| |
|
| ==3D structures of oligopeptide-binding protein== | | ==3D structures of oligopeptide-binding protein== |
|
| |
|
| Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
| | See [[ABC transporter]] |
| {{#tree:id=OrganizedByTopic|openlevels=0|
| |
|
| |
|
| *Oligopeptide-binding protein
| |
|
| |
| **[[1rkm]] – StOpp – ''Salmonella typhimurium''<br />
| |
| **[[3fto]] - LlOpp – ''Lactococcus lactis''<br />
| |
| **[[2wol]] - ScOpp – ''Streptomyces clavuligerus''<br />
| |
|
| |
| *Oligopeptide-binding protein complex with polypeptide
| |
|
| |
| **[[1ola]], [[1olc]] – StOpp + tetrapeptide<br />
| |
| **[[2olb]], [[1jet]], [[1jeu]], [[1jev]], [[1b1h]], [[1b3f]], [[1b3g]], [[1b3l]], [[1b32]], [[1b40]], [[1b46]], [[1b4z]], [[1b5i]], [[1b5j]], [[1b51]], [[1b52]], [[1b58]], [[1b9j]], [[1b0h]], [[1b05]], [[1qka]], [[1qkb]] - StOpp + tripeptide<br />
| |
| **[[2rkm]] - StOpp + dipeptide<br />
| |
| **[[1b4h]] - StOpp + Lys-DAB-Lys<br />
| |
| **[[1b5h]] - StOpp + Lys-DPP-Lys<br />
| |
| **[[1b6h]] - StOpp + Lys-NVA-Lys<br />
| |
| **[[1b7h]] - StOpp + Lys-NLE-Lys<br />
| |
| **[[1b2h]] - StOpp + Lys-ORN-Lys<br />
| |
| **[[1b1h]] - StOpp + Lys-HPE-Lys<br />
| |
| **[[1b3h]] - StOBpp+ Lys-ALC-Lys<br />
| |
| **[[2z23]] - Opp + tripeptide – ''Yersinia pestis''<br />
| |
| **[[3drf]], [[3dri]] - LlOpp + octapeptide<br />
| |
| **[[3rya]], [[3ryb]] - LlOpp + nonapeptide<br />
| |
| **[[3drg]] - LlOpp + bradykinin peptide<br />
| |
| **[[3drh]] - LlOpp + hexapeptide<br />
| |
| **[[3drj]] - LlOpp + PTH-related peptide<br />
| |
| **[[3drk]] - LlOpp + neuropeptide S<br />
| |
| **[[2wok]] - ScOpp + bradykinin peptide <br />
| |
| **[[2wop]] - ScOpp + arginine<br />
| |
| }}
| |
| == References == | | == References == |
| <references/> | | <references/> |
| [[Category:Topic Page]] | | [[Category:Topic Page]] |