EibD: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Andrzej Lyskowski, Michal Harel

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 {{ABSTRACT_PUBMED_21742268}}
-<!-- == Structure Features ==
+== Structure Features ==
 Space Group: H 3 (48.950x48.950x409.600, 90.00x90.00x120.00) <br>
 Resolution limit: 1.99 Å <br>
 R/R free: 0.1585/0.1855 <br>
-<br>
+Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XQH OCA].<br>
-Asymmetric unit contains a single polypeptide chain. The biological assembly consists of three copies of the monomer related by a three fold axis. -->
-<scene name='EibD/2xqh_ba/3'>TextToBeDisplayed</scene>
+<scene name='EibD/2xqh/1'>Asymmetric unit</scene> contains a single polypeptide chain. The <scene name='EibD/2xqh_ba/3'>biological assembly</scene> consists of three copies of the monomer related by a <scene name='EibD/2xqh_ba/11'>three fold axis</scene>.
-<scene name='EibD/2xqh_trimer/1'>TextToBeDisplayed</scene>
-<scene name='EibD/Test/1'>TextToBeDisplayed</scene>
+There are five distinct domains:
-<scene name='EibD/Test1/1'>TextToBeDisplayed</scene>
+<ul>
+ <li>YadA-like <scene name='EibD/2xqh_ba/5'> β-roll</scene> domain;
+ <li><scene name='EibD/2xqh_ba/6'>neck</scene> domain;
+ <li><scene name='EibD/2xqh_ba/7'>right handed</scene> coiled-coil domain;
+ <li><scene name='EibD/2xqh_ba/8'>mini β-sheet</scene> domain;
+ <li><scene name='EibD/2xqh_ba/9'>left handed</scene> coiled-coil domain;
+</ul>
+Coiled-coil features:
+<ul>
+ <li> cavities
+ <li> chloride coordination by <scene name='EibD/2xqh_ba/12'>Thr</scene> and <scene name='EibD/2xqh_ba/13'>Asn</scene> residues.
+</ul>
-[[2xqh]] is a single chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XQH OCA].
 == General information ==
 Antibodies: [http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_9 RCSB PDB Molecule of the Month by David Goodsell] <ref>September 2001 Molecule of the Month by David Goodsell http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_9</ref>