Nucleoporin: Difference between revisions

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{{STRUCTURE_1xip|  PDB=1xip  | SIZE=300| SCENE=Nucleoporin/Cv/1 |right|CAPTION=Yeast nucleoporin NUP159 N-terminal domain, [[1xip]] }}
<StructureSection load='' size='350' side='right' caption='Yeast nucleoporin NUP159 N-terminal domain (PDB entry [[1xip]])' scene='Nucleoporin/Cv/1'>
== Function ==
== Function ==
[[Nucleoporin|Nucleoporins]] (NUP) are constituents of the nuclear pore complex which regulates the flow of macromolecules across the nuclear envelope.  They are named according to their molecular weights. They contain a domain which binds the protein RAN (RANBD), N-terminal domain (NTD) and C-terminal domain (CTD)<ref>PMID:9159086</ref>. <br />
[[Nucleoporin|Nucleoporins]] (NUP) are constituents of the nuclear pore complex which regulates the flow of macromolecules across the nuclear envelope.  They are named according to their molecular weights. They contain a domain which binds the protein RAN (RANBD), N-terminal domain (NTD) and C-terminal domain (CTD)<ref>PMID:9159086</ref>. <br />
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== 3D Structures of Nucleoporin ==
== 3D Structures of Nucleoporin ==
[[Nucleoporin 3D structures]]


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
</StructureSection>
{{#tree:id=OrganizedByTopic|openlevels=0|
 
*NUP2
**[[3n7c]] – NUP2 RANBD – ''Ashbya gossypii''<br />
**[[2c1t]] – yNUP2 NTD +importrin alpha subunit - yeast<br />
*NUP35
**[[1wwh]] – mNUP35 MPPN domain - mouse<br />
*NUP37
**[[4fhl]] – fyNUP37 – fission yeast<br />
**[[4fhm]], [[4fhn]], [[4gq2]] - fyNUP37 + NUP120<br />
*NUP43
**[[4i79]] – hNUP43 + polypeptide<br />
*NUP50
**[[2ec1]] – hNUP50 RANBD - human<br />
**[[2c1m]] – mNUP50 NTD +importin <br />
**[[3tj3]] - hNUP50 NTD+importin<br />
*NUP53
**[[3p3d]] - NUP53 RRM domain - ''Pischia guillermondii''<br />
**[[4lir]] – hNUP53 residues 151-266<br />
*NUP54
**[[3t97]] – rNUP54 + NUP62 - rat<br />
**[[4j3h]] – rNUP54 (mutant)<br />
**[[3t98]] – rNUP54 + rNUP58/45 <br />
**[[4jo7]], [[4jo9]] – hNUP54 + hNUP58/45 <br />
*NUP58
**[[2osz]] – rNUP58/45 <br />
**[[4jq5]] – hNUP58/45 <br />
*NUP82
**[[3pbp]] – yNUP82 NTD + NUP116 CTD + NUP159 tail<br />
**[[3tkn]] - yNUP82 NTD + NUP98 + NUP159 tail<br />
*NUP84
**[[3jro]], [[3iko]] – yNUP84+NUP145+protein Sec13<br />
**[[4xmm]] - yNUP84+NUP85+NUP120+NUP145+protein Seh1 + antibody<br />
**[[4xmn]] - yNUP84+NUP85+NUP120+NUP145 + antibody<br />
*NUP85
**[[3f3f]], [[3f3g]], [[3f3p]], [[3ewe]] – yNUP85+Seh1<br />
*NUP98
**[[3mmy]] – hNUP98 fragment+mRNA export factor <br />
**[[2q5x]], [[2q5y]] – hNUP98 CTD<br />
**[[1ko6]] – hNUP98 CTD<br />
*NUP100
**[[3nf5]] – NUP100 CTD – ''Candida glabrata''<br />
*NUP107
**[[3i4r]], [[3cqc]], [[3cqg]] – hNUP107+NUP133<br />
*NUP116
**[[2aiv]] – yNUP116 CTD - NMR<br />
*NUP120
**[[3f7f]], [[3h7n]], [[3hxr]] – yNUP120<br />
*NUP133
**[[1xks]], [[4q9t]] – hNUP133 NTD<br />
**[[3kfo]] – yNUP133 CTD <br />
*NUP145
**[[3bg0]], [[3bg1]] – hNUP145+Sec13-related protein<br />
**[[3kep]], [[3kes]] – yNUP145 autoproteolytic domain<br />
**[[3jrp]] - yNUP145+protein Sec13<br />
*NUP153
**[[3gj3]], [[3gj4]], [[3gj5]], [[3gj6]], [[3gj7]], [[3gj8]], [[3ch5]] – hNUP153+RAN<br />
**[[2ebq]], [[2ebr]], [[2ebv]], [[2gqe]] - hNUP153 RANBD – NMR<br />
**[[2k0c]] – rNUP153 RANBD – NMR<br />
*NUP157
**[[4mhc]] – hNUP157 NTD<br />
*NUP159
**[[1xip]] – yNUP159 NTD<br />
**[[3rrm]] – yNUP159  residues 2-387 + NUP Gle1 + IP6 + ADP<br />
*NUP170
**[[3i5p]], [[3i5q]] – yNUP170<br />
*NUP192
**[[4ifq]] – yNUP192<br />
*NUP214
**[[3fmo]], [[3fmp]], [[3fhc]] – hNUP214+dead-box helicase<br />
**[[2oit]] – hNUP214 NTD<br />
*NUP358
**[[1z5s]] – hNUP358 IR1 domain+ubiquitin-conjugating enzyme+SMT3C+RAN CTD<br />
**[[1xke]] - hNUP358 RANBD - NMR<br />
*NUP1P
**[[2bpt]] – yNUP1P+importin β subunit<br />
*NUP2P
**[[1un0]] – yNUP2P NTD+importrin α subunit<br />
*NUP-NSP1
**[[1o6o]] – yNUP-NSP1 residues 497-608+importrin β subunit<br />
*NUP-CDC31
**[[2doq]], [[2gv5]] – yNUP-CDC31+SFI1P<br />
**[[3fwb]], [[3fwc]] - yNUP-CDC31+SAC3<br />
 
*NUP Gle1
**[[3peu]], [[3pev]], [[3rrn]]– yNUP-Gle1 + ATP-dependent RNA helicase Dbp5 (mutant) +IP6
 
**[[2rfo]], [[2qx5]] – yNic96<br />
**[[1gyb]] – NUP+yNTF2<br />
}}


== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Alexander Berchansky, Michal Harel, Jaime Prilusky, Joel L. Sussman